Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09155

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,934,758	+				-1.0
1,934,758	+				-0.3
1,934,758	+				+1.8
1,934,758	+				-0.2
1,934,758	+				-0.3
1,934,759	-				+0.2
1,934,759	-				+0.0
1,934,761	+				+0.2
1,934,902	-				-0.4
1,934,920	+				-2.3
1,934,921	-				+1.5
1,934,921	-				-0.5
1,934,921	-				+1.3
1,934,921	-				+0.2
1,934,922	+				+1.7
1,934,922	+				-1.0
1,934,923	-				-1.0
1,934,923	-				+2.4
1,934,923	-				-0.6
1,934,981	-		RR42_RS09150	0.11	-0.2
1,934,981	-		RR42_RS09150	0.11	+1.6
1,935,124	-		RR42_RS09150	0.30	+0.6
1,935,151	+		RR42_RS09150	0.33	-1.3
1,935,247	+		RR42_RS09150	0.46	-0.6
1,935,248	-		RR42_RS09150	0.46	+1.4
1,935,381	+		RR42_RS09150	0.64	-0.0
1,935,382	-		RR42_RS09150	0.64	+1.4
1,935,426	+		RR42_RS09150	0.70	-2.3
1,935,427	-		RR42_RS09150	0.70	-0.8
1,935,935	+		RR42_RS09155	0.39	-0.3
1,935,935	+		RR42_RS09155	0.39	+0.5
1,935,935	+		RR42_RS09155	0.39	+1.0
1,935,935	+		RR42_RS09155	0.39	-0.0
1,935,935	+		RR42_RS09155	0.39	+0.1
1,935,935	+		RR42_RS09155	0.39	+1.7
1,935,936	-		RR42_RS09155	0.39	-0.6
1,935,936	-		RR42_RS09155	0.39	-0.9
1,935,936	-		RR42_RS09155	0.39	+0.9
1,935,936	-		RR42_RS09155	0.39	+2.5
1,935,936	-		RR42_RS09155	0.39	+0.4
1,935,936	-		RR42_RS09155	0.39	-0.6
1,935,960	-		RR42_RS09155	0.43	+0.3
1,936,073	+		RR42_RS09155	0.60	-0.4
1,936,073	+		RR42_RS09155	0.60	-0.0
1,936,083	-		RR42_RS09155	0.62	-2.0
1,936,205	+		RR42_RS09155	0.81	+3.0
1,936,392	+				-1.8
1,936,392	+				+0.4
1,936,392	+				+1.1
1,936,393	-				+0.8
1,936,430	-				+0.4
1,936,588	+		RR42_RS09160	0.31	-1.0
1,936,589	-		RR42_RS09160	0.31	-0.2
1,936,763	-		RR42_RS09160	0.58	-3.0
1,936,764	+		RR42_RS09160	0.58	-1.6
1,936,764	+		RR42_RS09160	0.58	-3.7
1,936,764	+		RR42_RS09160	0.58	+1.0
1,936,764	+		RR42_RS09160	0.58	-2.6
1,936,764	+		RR42_RS09160	0.58	+0.2
1,936,764	+		RR42_RS09160	0.58	+0.9
1,936,765	-		RR42_RS09160	0.58	-2.5
1,936,765	-		RR42_RS09160	0.58	-1.7
1,936,765	-		RR42_RS09160	0.58	+0.1
1,937,002	+				+0.7
1,937,002	+				-0.2
1,937,014	+				-0.9
1,937,065	+				+0.2
1,937,066	-				+0.2
1,937,066	-				-2.7
1,937,066	-				-0.0
1,937,070	+				-2.7
1,937,143	+				+0.3
1,937,144	-				+0.1
1,937,144	-				+0.1
1,937,144	-				-0.3
1,937,312	+		RR42_RS09165	0.20	-0.2
1,937,312	+		RR42_RS09165	0.20	+0.6
1,937,313	-		RR42_RS09165	0.20	-0.1
1,937,313	-		RR42_RS09165	0.20	+0.6
1,937,313	-		RR42_RS09165	0.20	-0.8
1,937,313	-		RR42_RS09165	0.20	-1.8