Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07645

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,636,902	+		RR42_RS07640	0.44	-1.1
1,636,902	+		RR42_RS07640	0.44	-2.1
1,636,902	+		RR42_RS07640	0.44	-1.5
1,636,903	-		RR42_RS07640	0.44	-0.5
1,636,903	-		RR42_RS07640	0.44	+3.6
1,636,913	-		RR42_RS07640	0.45	-0.2
1,637,015	-		RR42_RS07640	0.52	-2.0
1,637,038	+		RR42_RS07640	0.54	-1.0
1,637,039	-		RR42_RS07640	0.54	+2.3
1,637,039	-		RR42_RS07640	0.54	-2.4
1,637,044	+		RR42_RS07640	0.54	-3.0
1,637,045	-		RR42_RS07640	0.54	-0.2
1,637,560	+				-0.9
1,637,560	+				+0.4
1,637,560	+				-0.5
1,637,560	+				-2.3
1,637,560	+				+0.5
1,637,561	-				+1.3
1,637,561	-				+0.5
1,637,561	-				-1.0
1,637,690	+				+0.5
1,637,691	-				-0.3
1,637,732	+				-1.8
1,637,733	-				+0.8
1,637,733	-				-0.0
1,637,733	-				+0.5
1,637,733	-				+0.5
1,637,791	-				+0.4
1,638,272	+		RR42_RS07645	0.43	-1.3
1,638,887	+				+1.5
1,638,997	+				+0.2
1,638,997	+				-1.3
1,638,998	-				-0.2
1,638,998	-				+0.9
1,639,153	+		RR42_RS07650	0.23	+0.0
1,639,153	+		RR42_RS07650	0.23	+0.6
1,639,154	-		RR42_RS07650	0.23	-0.9
1,639,154	-		RR42_RS07650	0.23	-0.4
1,639,257	+		RR42_RS07650	0.39	-0.0
1,639,258	-		RR42_RS07650	0.40	-1.4
1,639,258	-		RR42_RS07650	0.40	-0.0
1,639,258	-		RR42_RS07650	0.40	+1.6
1,639,275	+		RR42_RS07650	0.42	-1.7
1,639,275	+		RR42_RS07650	0.42	+0.0
1,639,275	+		RR42_RS07650	0.42	-0.8
1,639,275	+		RR42_RS07650	0.42	-1.6
1,639,356	+		RR42_RS07650	0.55	-0.2
1,639,357	-		RR42_RS07650	0.55	-0.1
1,639,357	-		RR42_RS07650	0.55	+0.2
1,639,604	+				+0.2
1,639,605	-				-0.3
1,639,605	-				-0.2
1,639,609	-				+0.1
1,639,609	-				-0.8
1,639,609	-				+1.9
1,639,714	-				+0.0
1,639,870	+				+0.0
1,639,871	-				-2.0
1,639,871	-				-1.5
1,639,943	+		RR42_RS07655	0.12	-3.0
1,639,944	-		RR42_RS07655	0.12	-0.8
1,639,944	-		RR42_RS07655	0.12	+0.2
1,639,944	-		RR42_RS07655	0.12	+0.2
1,639,952	+		RR42_RS07655	0.12	-0.4