Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07090

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,522,267	+		RR42_RS07085	0.54	+0.0
1,522,284	+		RR42_RS07085	0.55	-0.0
1,522,285	-		RR42_RS07085	0.55	+0.8
1,522,300	+		RR42_RS07085	0.56	-1.1
1,522,300	+		RR42_RS07085	0.56	-1.5
1,522,301	-		RR42_RS07085	0.56	-0.6
1,522,334	-		RR42_RS07085	0.58	+0.5
1,522,790	+		RR42_RS07085	0.82	+1.7
1,522,845	-		RR42_RS07085	0.85	-1.1
1,522,916	-		RR42_RS07085	0.89	+0.9
1,523,119	+				-0.9
1,523,155	-				+0.1
1,523,356	+		RR42_RS07090	0.51	-0.5
1,523,386	+		RR42_RS07090	0.58	+0.1
1,523,522	+				-1.8
1,523,522	+				-2.0
1,523,522	+				+0.3
1,523,614	+				+0.6
1,523,614	+				-0.7
1,523,615	-				+0.1
1,523,628	-				-1.7
1,523,645	+				+0.3
1,523,707	+				+0.6
1,523,707	+				-1.1
1,523,732	+				-1.3
1,523,744	+				+0.2
1,523,745	-				-0.4
1,523,745	-				-1.9
1,523,746	+				+1.1
1,523,783	+				-1.9
1,523,798	+				+0.1
1,523,798	+				-0.1
1,523,799	-				+0.6
1,523,988	+		RR42_RS07095	0.46	-2.7
1,523,989	-		RR42_RS07095	0.46	+1.0
1,523,989	-		RR42_RS07095	0.46	-0.9
1,523,989	-		RR42_RS07095	0.46	-1.0
1,524,002	-		RR42_RS07095	0.49	-1.4
1,524,026	-		RR42_RS07095	0.54	-1.3
1,524,026	-		RR42_RS07095	0.54	-0.3
1,524,026	-		RR42_RS07095	0.54	+2.5
1,524,086	+		RR42_RS07095	0.66	+0.3
1,524,087	-		RR42_RS07095	0.66	-0.6
1,524,209	+				-0.5
1,524,209	+				-0.9
1,524,209	+				-0.7
1,524,209	+				-1.5
1,524,209	+				+1.2
1,524,210	-				+0.2
1,524,210	-				+0.6
1,524,210	-				-0.4
1,524,269	+				+0.2
1,524,269	+				+0.4
1,524,334	-		RR42_RS07100	0.16	+0.0
1,524,472	+		RR42_RS07100	0.43	-0.6
1,524,472	+		RR42_RS07100	0.43	-0.2
1,524,473	-		RR42_RS07100	0.43	-1.5
1,524,473	-		RR42_RS07100	0.43	+1.0
1,524,487	+		RR42_RS07100	0.46	+0.7
1,524,487	+		RR42_RS07100	0.46	+0.0
1,524,488	-		RR42_RS07100	0.46	+1.3
1,524,488	-		RR42_RS07100	0.46	+0.9
1,524,488	-		RR42_RS07100	0.46	+1.5