Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06975

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,498,394	-		RR42_RS06970	0.31	+0.3
1,498,394	-		RR42_RS06970	0.31	+0.2
1,498,429	+		RR42_RS06970	0.33	-1.7
1,498,429	+		RR42_RS06970	0.33	-1.9
1,498,478	-		RR42_RS06970	0.37	-1.5
1,498,659	+		RR42_RS06970	0.50	+2.5
1,498,679	-		RR42_RS06970	0.51	-0.1
1,498,728	-		RR42_RS06970	0.54	-0.5
1,498,795	+		RR42_RS06970	0.59	+1.7
1,498,813	+		RR42_RS06970	0.60	-1.0
1,498,813	+		RR42_RS06970	0.60	-0.3
1,498,813	+		RR42_RS06970	0.60	-1.5
1,498,814	-		RR42_RS06970	0.60	-1.6
1,498,814	-		RR42_RS06970	0.60	+0.1
1,498,979	-		RR42_RS06970	0.72	-2.3
1,498,979	-		RR42_RS06970	0.72	-1.5
1,499,055	-		RR42_RS06970	0.77	+0.1
1,499,103	+		RR42_RS06970	0.80	+1.0
1,499,312	-				+1.2
1,499,312	-				+0.3
1,499,356	+				+0.7
1,499,357	-				+0.4
1,499,357	-				-1.8
1,499,464	+				-1.0
1,499,465	-				-1.3
1,499,465	-				+1.4
1,499,487	+		RR42_RS06975	0.11	+0.1
1,499,488	-		RR42_RS06975	0.11	-0.1
1,499,488	-		RR42_RS06975	0.11	+0.4
1,499,521	-		RR42_RS06975	0.15	+1.2
1,499,521	-		RR42_RS06975	0.15	-0.3
1,499,521	-		RR42_RS06975	0.15	+1.2
1,499,521	-		RR42_RS06975	0.15	+0.2
1,499,616	+		RR42_RS06975	0.26	+1.2
1,499,622	+		RR42_RS06975	0.26	-0.8
1,499,648	+		RR42_RS06975	0.29	-0.1
1,499,648	+		RR42_RS06975	0.29	-0.9
1,499,710	+		RR42_RS06975	0.36	-0.7
1,499,742	+		RR42_RS06975	0.40	+0.0
1,499,773	+				+0.0
1,499,851	+		RR42_RS06975	0.53	+0.1
1,499,852	-		RR42_RS06975	0.53	-0.7
1,499,906	-		RR42_RS06975	0.59	+2.3
1,499,945	+		RR42_RS06975	0.63	+1.4
1,500,051	+		RR42_RS06975	0.76	-1.8
1,500,051	+		RR42_RS06975	0.76	+3.2
1,500,052	-		RR42_RS06975	0.76	+0.4
1,500,052	-		RR42_RS06975	0.76	-0.1
1,500,207	+				-1.5
1,500,224	+				-0.7
1,500,224	+				+2.3
1,500,284	-				+0.0
1,500,350	+				-1.2
1,500,386	+				+0.0
1,500,386	+				+2.0
1,500,386	+				+0.2
1,500,386	+				-0.2
1,500,386	+				+3.2
1,500,386	+				+0.8
1,500,386	+				+1.2
1,500,387	-				+1.4
1,500,387	-				+1.5
1,500,393	-				-0.2
1,500,413	-				+2.2
1,500,451	-				+0.2
1,500,478	+				-2.5
1,500,478	+				-1.8
1,500,479	-				+0.9
1,500,557	-				+1.0
1,500,672	+				-2.4
1,500,672	+				-1.4
1,500,672	+				+1.3
1,500,761	+				+0.8
1,500,762	-				-1.9
1,500,773	+				+0.3
1,500,774	-				+0.6
1,500,801	+				+1.1
1,500,802	-				-3.4
1,500,802	-				+0.0
1,500,821	-				-1.5
1,500,911	-				+0.1
1,500,937	+				-3.2
1,500,938	-				-1.5
1,501,065	-				-2.3
1,501,085	+				-1.4
1,501,109	+				+0.6
1,501,147	+				+0.1
1,501,148	-				+0.3
1,501,151	-				+2.3
1,501,209	-				-0.9
1,501,255	+				+0.2