Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06095
Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Deoxyribonucleic from herring sperm 5 mg/mL |
---|---|---|---|---|---|
remove | |||||
1,336,560 | + | RR42_RS06090 | 0.47 | -1.1 | |
1,336,870 | + | RR42_RS06090 | 0.65 | +0.9 | |
1,336,870 | + | RR42_RS06090 | 0.65 | -0.4 | |
1,336,871 | - | RR42_RS06090 | 0.65 | -1.1 | |
1,337,146 | + | RR42_RS06090 | 0.82 | -0.1 | |
1,337,147 | - | RR42_RS06090 | 0.82 | +1.0 | |
1,337,218 | + | RR42_RS06090 | 0.86 | -0.5 | |
1,337,219 | - | RR42_RS06090 | 0.86 | -0.9 | |
1,337,269 | + | RR42_RS06090 | 0.89 | -0.5 | |
1,337,495 | - | -1.5 | |||
1,337,495 | - | +1.7 | |||
1,337,974 | + | RR42_RS06095 | 0.44 | +2.9 | |
1,338,050 | + | RR42_RS06095 | 0.50 | +4.2 | |
1,338,350 | - | RR42_RS06095 | 0.77 | +2.8 | |
1,338,623 | - | -1.3 | |||
1,338,623 | - | -0.2 | |||
1,338,650 | + | -0.5 |
Or see this region's nucleotide sequence