Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS05950

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,308,693	+				-2.1
1,308,784	+				+1.2
1,308,784	+				+0.7
1,308,784	+				-2.6
1,308,784	+				+2.1
1,308,785	-				+0.8
1,308,785	-				-0.4
1,308,785	-				+0.5
1,309,005	+		RR42_RS05945	0.47	-2.4
1,309,006	-		RR42_RS05945	0.47	-2.0
1,309,052	+		RR42_RS05945	0.58	-0.8
1,309,052	+		RR42_RS05945	0.58	-0.6
1,309,291	+				+0.8
1,309,292	-				-1.1
1,309,292	-				+0.2
1,309,324	+				-0.4
1,309,324	+				+0.4
1,309,325	-				-1.7
1,309,340	-				+1.0
1,309,375	+		RR42_RS05950	0.11	+1.0
1,309,376	-		RR42_RS05950	0.11	-0.3
1,309,376	-		RR42_RS05950	0.11	+0.5
1,309,376	-		RR42_RS05950	0.11	-0.4
1,309,402	+		RR42_RS05950	0.13	-2.7
1,309,405	+		RR42_RS05950	0.13	-1.1
1,309,406	-		RR42_RS05950	0.14	-1.1
1,309,406	-		RR42_RS05950	0.14	-0.7
1,309,406	-		RR42_RS05950	0.14	-0.4
1,309,483	+		RR42_RS05950	0.20	+2.0
1,309,528	+		RR42_RS05950	0.23	+0.3
1,309,528	+		RR42_RS05950	0.23	+0.3
1,309,528	+		RR42_RS05950	0.23	+0.7
1,309,529	-		RR42_RS05950	0.24	+0.7
1,309,529	-		RR42_RS05950	0.24	+0.9
1,309,529	-		RR42_RS05950	0.24	-2.4
1,309,531	+		RR42_RS05950	0.24	-0.1
1,309,531	+				+2.2
1,309,531	+		RR42_RS05950	0.24	-2.2
1,309,532	-		RR42_RS05950	0.24	-0.8
1,309,532	-		RR42_RS05950	0.24	-0.4
1,309,532	-		RR42_RS05950	0.24	-0.7
1,309,534	+		RR42_RS05950	0.24	+0.8
1,309,534	+		RR42_RS05950	0.24	+1.5
1,309,535	-		RR42_RS05950	0.24	-0.4
1,309,535	-		RR42_RS05950	0.24	-1.4
1,309,535	-		RR42_RS05950	0.24	+0.6
1,309,569	+		RR42_RS05950	0.27	+0.3
1,309,569	+		RR42_RS05950	0.27	-1.4
1,309,569	+		RR42_RS05950	0.27	+0.4
1,309,569	+		RR42_RS05950	0.27	+1.2
1,309,569	+		RR42_RS05950	0.27	-3.2
1,309,569	+		RR42_RS05950	0.27	-0.3
1,309,570	-		RR42_RS05950	0.27	-0.2
1,309,570	-		RR42_RS05950	0.27	-0.1
1,309,570	-		RR42_RS05950	0.27	+0.8
1,309,607	+		RR42_RS05950	0.30	+0.4
1,309,608	-		RR42_RS05950	0.30	-1.0
1,309,608	-		RR42_RS05950	0.30	+0.1
1,309,717	+		RR42_RS05950	0.39	-1.8
1,309,717	+		RR42_RS05950	0.39	+1.0
1,309,718	-		RR42_RS05950	0.39	-1.0
1,309,720	+		RR42_RS05950	0.39	-3.4
1,309,720	+		RR42_RS05950	0.39	+0.3
1,309,720	+		RR42_RS05950	0.39	+0.0
1,309,721	-		RR42_RS05950	0.39	-0.1
1,309,721	-		RR42_RS05950	0.39	-1.1
1,309,721	-		RR42_RS05950	0.39	+0.4
1,309,807	+		RR42_RS05950	0.46	+0.9
1,309,852	+		RR42_RS05950	0.50	-1.5
1,309,852	+		RR42_RS05950	0.50	+0.3
1,309,853	-		RR42_RS05950	0.50	-1.7
1,309,853	-		RR42_RS05950	0.50	+1.4
1,309,853	-		RR42_RS05950	0.50	+1.6
1,309,918	+		RR42_RS05950	0.55	+2.5
1,309,918	+		RR42_RS05950	0.55	+1.5
1,309,918	+		RR42_RS05950	0.55	+0.2
1,309,919	-		RR42_RS05950	0.55	+1.2
1,310,197	+		RR42_RS05950	0.78	+1.2
1,310,197	+		RR42_RS05950	0.78	+1.9
1,310,197	+		RR42_RS05950	0.78	-1.1
1,310,198	-		RR42_RS05950	0.78	+0.2
1,310,579	-				+0.3
1,310,598	+				+1.0
1,310,598	+				-3.0
1,310,598	+				-0.8
1,310,598	+				-1.4
1,310,599	-				+0.1
1,310,599	-				-0.3
1,310,599	-				+0.7
1,310,609	+				-1.4
1,310,609	+				+0.1
1,310,609	+				-0.0
1,310,610	-				+1.4
1,310,642	+				+0.8
1,310,695	+				+1.2
1,310,708	+				+2.9
1,310,933	+		RR42_RS05955	0.60	+1.6
1,311,120	-				+0.3
1,311,192	+				+1.4
1,311,192	+				+0.2
1,311,195	+				+1.0
1,311,195	+				+0.4
1,311,196	-				-1.2
1,311,196	-				+0.9
1,311,385	+		RR42_RS05960	0.10	+0.2
1,311,407	-		RR42_RS05960	0.13	+2.4