Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS05360

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,185,642	+		RR42_RS05355	0.46	+0.6
1,185,643	-		RR42_RS05355	0.46	-1.1
1,185,643	-		RR42_RS05355	0.46	-1.1
1,185,643	-		RR42_RS05355	0.46	-2.1
1,185,643	-		RR42_RS05355	0.46	-0.4
1,185,910	-		RR42_RS05355	0.71	+0.3
1,186,042	-		RR42_RS05355	0.83	-0.1
1,186,042	-		RR42_RS05355	0.83	-0.5
1,186,042	-		RR42_RS05355	0.83	-0.6
1,186,044	+		RR42_RS05355	0.83	-3.4
1,186,044	+		RR42_RS05355	0.83	-0.1
1,186,044	+		RR42_RS05355	0.83	+2.0
1,186,045	+		RR42_RS05355	0.83	-1.1
1,186,045	-		RR42_RS05355	0.83	+0.2
1,186,280	+				+0.6
1,186,284	-				-0.9
1,186,296	+				+0.5
1,186,345	+				+0.0
1,186,346	-				+0.2
1,186,346	-				-2.3
1,186,346	-				+1.5
1,186,399	-				+0.7
1,186,399	-				-0.5
1,186,399	-				-1.1
1,186,890	+		RR42_RS05360	0.89	-0.6
1,186,891	-		RR42_RS05360	0.89	-1.0
1,187,119	+		RR42_RS05365	0.53	-0.3
1,187,120	-		RR42_RS05365	0.53	+1.4
1,187,120	-		RR42_RS05365	0.53	+1.8
1,187,120	-		RR42_RS05365	0.53	-0.9
1,187,132	+		RR42_RS05365	0.57	-2.1
1,187,132	+		RR42_RS05365	0.57	-0.8
1,187,133	-		RR42_RS05365	0.57	-1.7
1,187,133	-		RR42_RS05365	0.57	-1.0
1,187,929	-		RR42_RS05370	0.26	-0.4