Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS05285

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,165,183	-				-1.9
1,165,365	+				-1.3
1,165,365	+				+0.7
1,165,366	-				+0.1
1,165,366	-				-1.1
1,165,366	-				-0.8
1,165,367	+				-1.2
1,165,368	-				-1.0
1,165,368	-				-0.4
1,165,368	-				+0.3
1,165,368	-				+0.5
1,165,371	+				+0.8
1,165,371	+				+1.1
1,165,372	-				-0.3
1,165,412	-		RR42_RS05280	0.10	-1.3
1,165,479	+		RR42_RS05280	0.21	-1.8
1,165,479	+		RR42_RS05280	0.21	+1.0
1,165,479	+		RR42_RS05280	0.21	+1.0
1,165,479	+		RR42_RS05280	0.21	+0.3
1,165,481	+		RR42_RS05280	0.22	-0.1
1,165,481	+		RR42_RS05280	0.22	+0.4
1,165,481	+		RR42_RS05280	0.22	-1.7
1,165,482	-		RR42_RS05280	0.22	+0.2
1,165,482	-		RR42_RS05280	0.22	+1.1
1,165,482	-		RR42_RS05280	0.22	-1.2
1,165,482	-		RR42_RS05280	0.22	+0.0
1,165,482	-		RR42_RS05280	0.22	+1.2
1,165,487	+		RR42_RS05280	0.22	+0.6
1,165,751	+		RR42_RS05280	0.65	-0.7
1,165,949	+				+0.2
1,165,950	-				+1.5
1,165,950	-				+0.7
1,165,984	-				-0.8
1,166,011	+				-0.1
1,166,089	+				-1.3
1,166,089	+				-0.1
1,166,089	+				+0.4
1,166,110	+				-0.3
1,166,111	-				-0.9
1,166,111	-				-1.5
1,166,111	-				-0.0
1,166,111	-				+1.4
1,166,149	+				-3.2
1,166,149	+				+0.5
1,166,272	+		RR42_RS05285	0.15	-2.5
1,166,272	+		RR42_RS05285	0.15	-1.1
1,166,273	-		RR42_RS05285	0.15	+0.2
1,166,404	+		RR42_RS05285	0.23	+0.8
1,166,405	-		RR42_RS05285	0.23	+0.9
1,166,405	-		RR42_RS05285	0.23	-1.1
1,166,434	+		RR42_RS05285	0.24	+0.5
1,166,435	-		RR42_RS05285	0.24	-1.3
1,166,602	+		RR42_RS05285	0.34	+0.0
1,166,706	+		RR42_RS05285	0.40	+0.2
1,166,706	+		RR42_RS05285	0.40	-1.8
1,166,722	+		RR42_RS05285	0.41	+0.9
1,166,722	+		RR42_RS05285	0.41	-0.9
1,166,723	-		RR42_RS05285	0.41	-1.3
1,166,723	-		RR42_RS05285	0.41	-1.1
1,166,723	-		RR42_RS05285	0.41	-2.8
1,166,740	+		RR42_RS05285	0.42	-0.1
1,166,780	+		RR42_RS05285	0.44	-0.2
1,166,782	+		RR42_RS05285	0.44	-0.3
1,166,783	-		RR42_RS05285	0.44	+1.6
1,166,783	-		RR42_RS05285	0.44	+1.7
1,166,783	-		RR42_RS05285	0.44	-0.4
1,166,783	-		RR42_RS05285	0.44	+1.0
1,166,783	-		RR42_RS05285	0.44	-1.5
1,166,812	+		RR42_RS05285	0.46	-0.6
1,166,812	+		RR42_RS05285	0.46	+0.4
1,166,909	-		RR42_RS05285	0.51	+0.6
1,167,028	+		RR42_RS05285	0.58	+0.3
1,167,029	-		RR42_RS05285	0.58	-1.3
1,167,092	-		RR42_RS05285	0.62	-1.3
1,167,331	+		RR42_RS05285	0.76	+0.2
1,167,331	+		RR42_RS05285	0.76	+0.0
1,167,332	-		RR42_RS05285	0.76	-0.3
1,167,370	+		RR42_RS05285	0.78	+0.5
1,167,381	-		RR42_RS05285	0.78	-1.8
1,167,382	+		RR42_RS05285	0.78	-1.6
1,167,383	-		RR42_RS05285	0.79	+1.8
1,167,853	+				+0.6
1,167,853	+				+0.0
1,167,854	-				+0.0
1,167,854	-				-1.2
1,167,854	-				-0.6
1,167,855	+				+0.5
1,167,856	-				+1.5
1,167,856	-				+1.6
1,168,000	+				-0.0
1,168,000	+				+0.8
1,168,005	+				-1.4
1,168,079	+				+0.8
1,168,079	+				-0.8
1,168,079	+				-0.3
1,168,080	-				-1.1
1,168,129	-				-0.5
1,168,447	+		RR42_RS05290	0.59	-0.4
1,168,572	+		RR42_RS05290	0.79	-1.1
1,168,700	-				+0.0
1,168,700	-				-0.8
1,168,700	-				+0.7