Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS04890

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,083,809	-		RR42_RS04880	0.78	-0.7
1,083,854	+		RR42_RS04880	0.82	-0.3
1,083,920	+		RR42_RS04880	0.87	+0.6
1,083,949	-		RR42_RS04880	0.90	+0.2
1,083,957	-				+0.7
1,084,222	+		RR42_RS04885	0.24	-0.6
1,084,333	+		RR42_RS04885	0.42	-0.4
1,084,333	+		RR42_RS04885	0.42	+0.3
1,084,334	-		RR42_RS04885	0.42	+1.4
1,084,334	-		RR42_RS04885	0.42	+1.3
1,084,336	+		RR42_RS04885	0.42	+1.5
1,084,336	+		RR42_RS04885	0.42	+0.1
1,084,337	-		RR42_RS04885	0.43	-0.7
1,084,337	-		RR42_RS04885	0.43	+0.9
1,084,337	-		RR42_RS04885	0.43	+0.6
1,084,337	-		RR42_RS04885	0.43	+3.3
1,084,337	-		RR42_RS04885	0.43	-0.2
1,084,339	+		RR42_RS04885	0.43	+1.9
1,084,340	-		RR42_RS04885	0.43	+1.2
1,084,340	-		RR42_RS04885	0.43	+0.8
1,084,442	-		RR42_RS04885	0.60	+0.3
1,084,704	-				-1.9
1,084,895	+		RR42_RS04890	0.26	+1.5
1,084,896	-		RR42_RS04890	0.27	-0.9
1,085,238	-		RR42_RS04890	0.74	-0.2
1,085,366	+				+2.3
1,085,366	+				+0.3
1,085,367	-				+0.5
1,085,385	+				-0.3
1,085,385	+				-1.5
1,085,906	+		RR42_RS04895	0.37	-0.7
1,085,907	-		RR42_RS04895	0.37	-1.7
1,085,907	-		RR42_RS04895	0.37	-1.1
1,085,907	-		RR42_RS04895	0.37	-3.8
1,085,988	+		RR42_RS04895	0.46	-0.6
1,085,988	+		RR42_RS04895	0.46	-1.3
1,085,988	+		RR42_RS04895	0.46	-1.9
1,085,988	+		RR42_RS04895	0.46	-3.9
1,085,988	+		RR42_RS04895	0.46	-2.2
1,085,988	+		RR42_RS04895	0.46	-1.0
1,085,988	+		RR42_RS04895	0.46	-2.0
1,085,989	-		RR42_RS04895	0.46	-1.2
1,085,989	-		RR42_RS04895	0.46	-1.2
1,085,989	-		RR42_RS04895	0.46	-2.6
1,085,989	-		RR42_RS04895	0.46	-3.0
1,085,989	-		RR42_RS04895	0.46	-0.0
1,086,094	+		RR42_RS04895	0.58	-3.4
1,086,104	+		RR42_RS04895	0.59	-2.4
1,086,105	-		RR42_RS04895	0.59	-3.1
1,086,105	-		RR42_RS04895	0.59	-0.3
1,086,111	+		RR42_RS04895	0.60	+0.3
1,086,111	+		RR42_RS04895	0.60	-2.7
1,086,111	+		RR42_RS04895	0.60	-2.2
1,086,111	+		RR42_RS04895	0.60	-2.4
1,086,181	+		RR42_RS04895	0.67	-2.0
1,086,181	+		RR42_RS04895	0.67	-0.9
1,086,217	-		RR42_RS04895	0.71	-0.8
1,086,411	+				-3.2
1,086,411	+				-2.4
1,086,411	+				-0.5
1,086,412	-				-2.0
1,086,412	-				-2.6
1,086,412	-				+0.1