Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS04315
Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Deoxyribonucleic from herring sperm 5 mg/mL |
---|---|---|---|---|---|
remove | |||||
957,056 | + | +1.4 | |||
957,056 | + | -1.2 | |||
957,056 | + | +0.4 | |||
957,057 | - | -2.5 | |||
957,057 | - | -0.7 | |||
957,210 | + | RR42_RS04310 | 0.11 | -2.2 | |
957,210 | + | RR42_RS04310 | 0.11 | +1.0 | |
957,211 | - | RR42_RS04310 | 0.11 | +1.4 | |
957,645 | + | RR42_RS04310 | 0.73 | -0.2 | |
957,646 | - | RR42_RS04310 | 0.73 | -0.6 | |
957,865 | + | -0.2 | |||
957,866 | - | -0.6 | |||
957,866 | - | +1.7 | |||
957,867 | + | -0.1 | |||
957,867 | + | -1.6 | |||
957,868 | - | -0.8 | |||
957,868 | - | +1.2 | |||
957,971 | + | -0.4 | |||
957,972 | - | +0.0 | |||
957,972 | - | +1.0 | |||
958,978 | + | +1.0 | |||
958,978 | + | +0.7 | |||
958,978 | + | +1.3 | |||
958,979 | - | -1.3 | |||
958,979 | - | +0.8 | |||
958,979 | - | -1.2 | |||
958,979 | - | -0.9 | |||
958,979 | - | -0.2 | |||
958,979 | - | +1.0 | |||
959,041 | + | +0.5 | |||
959,042 | - | +0.5 | |||
959,042 | - | -0.4 |
Or see this region's nucleotide sequence