Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS10745

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
2,416,071	+				-1.1
2,416,151	+				-0.9
2,416,151	+				+0.2
2,416,327	-		HSERO_RS10745	0.19	-0.9
2,416,365	-		HSERO_RS10745	0.22	+0.1
2,416,567	-		HSERO_RS10745	0.36	-1.0
2,416,642	+		HSERO_RS10745	0.42	-1.2
2,416,778	-		HSERO_RS10745	0.52	-0.8
2,417,228	+		HSERO_RS10745	0.84	-0.5
2,417,251	+		HSERO_RS10745	0.86	-0.9
2,417,380	-				-0.4
2,417,547	+		HSERO_RS10750	0.16	+0.2
2,417,636	+		HSERO_RS10750	0.32	+0.5
2,417,654	-				+0.9
2,418,049	+				+0.6