Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c34240

Experiment: Adenosine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Adenosine (N)
3,587,264	-				-1.1
3,587,317	+		PGA1_c34230	0.11	+0.3
3,587,340	+		PGA1_c34230	0.14	-1.2
3,587,340	+		PGA1_c34230	0.14	+0.4
3,587,340	+		PGA1_c34230	0.14	+0.9
3,587,340	+		PGA1_c34230	0.14	-0.8
3,587,340	+		PGA1_c34230	0.14	+1.1
3,587,348	-		PGA1_c34230	0.15	-0.2
3,587,348	-		PGA1_c34230	0.15	-0.8
3,587,348	-		PGA1_c34230	0.15	-0.3
3,587,395	-		PGA1_c34230	0.20	-1.7
3,587,418	-		PGA1_c34230	0.22	-0.1
3,587,424	+		PGA1_c34230	0.23	-0.1
3,587,427	-		PGA1_c34230	0.23	-1.8
3,587,432	-		PGA1_c34230	0.24	+0.6
3,587,432	-		PGA1_c34230	0.24	-1.6
3,587,432	-		PGA1_c34230	0.24	-0.3
3,587,462	+		PGA1_c34230	0.27	-1.8
3,587,475	+		PGA1_c34230	0.28	+1.0
3,587,483	-		PGA1_c34230	0.29	-1.8
3,587,485	+		PGA1_c34230	0.29	+0.4
3,587,531	-		PGA1_c34230	0.34	-0.8
3,587,581	-		PGA1_c34230	0.39	+1.5
3,587,663	-		PGA1_c34230	0.48	-1.0
3,587,828	-				+0.6
3,587,835	-		PGA1_c34230	0.66	+0.7
3,587,842	+		PGA1_c34230	0.67	-1.1
3,587,850	-		PGA1_c34230	0.68	+1.0
3,587,851	+		PGA1_c34230	0.68	-0.2
3,587,915	-		PGA1_c34230	0.75	-0.6
3,587,927	+		PGA1_c34230	0.76	-1.2
3,588,063	+				-0.1
3,588,063	-				+0.1
3,588,078	+				+1.3
3,588,093	-				+0.9
3,588,093	-				+1.1
3,588,180	-				+1.0
3,588,222	-				-3.3
3,588,225	+				-2.9
3,588,233	-				-2.1
3,588,233	-				-2.1
3,588,287	+				-3.3
3,588,373	+				+0.4
3,588,408	+				-2.4
3,588,471	-		PGA1_c34240	0.11	-3.3
3,588,532	+		PGA1_c34240	0.15	-1.0
3,588,562	+		PGA1_c34240	0.16	-0.7
3,588,570	-		PGA1_c34240	0.17	-2.1
3,588,587	-		PGA1_c34240	0.18	-3.8
3,588,761	-		PGA1_c34240	0.27	-3.5
3,588,767	+		PGA1_c34240	0.28	-3.0
3,588,777	+		PGA1_c34240	0.28	-2.4
3,588,778	+		PGA1_c34240	0.28	-2.6
3,588,788	+		PGA1_c34240	0.29	-0.1
3,588,788	+		PGA1_c34240	0.29	-1.9
3,588,796	-		PGA1_c34240	0.29	-2.4
3,588,796	-		PGA1_c34240	0.29	-3.3
3,588,796	-		PGA1_c34240	0.29	-1.3
3,588,912	-		PGA1_c34240	0.36	-3.1
3,588,914	+		PGA1_c34240	0.36	-1.6
3,588,944	+		PGA1_c34240	0.37	-3.1
3,589,048	-		PGA1_c34240	0.43	-2.8
3,589,057	-		PGA1_c34240	0.44	-2.7
3,589,071	-		PGA1_c34240	0.44	-2.7
3,589,099	-		PGA1_c34240	0.46	-2.5
3,589,099	-		PGA1_c34240	0.46	-3.6
3,589,114	-		PGA1_c34240	0.47	-3.5
3,589,122	-		PGA1_c34240	0.47	-4.1
3,589,126	-		PGA1_c34240	0.47	-1.7
3,589,128	+		PGA1_c34240	0.48	-3.0
3,589,144	-		PGA1_c34240	0.48	-3.5
3,589,154	-		PGA1_c34240	0.49	-2.0
3,589,164	-		PGA1_c34240	0.50	-2.1
3,589,214	-		PGA1_c34240	0.52	-3.2
3,589,274	+		PGA1_c34240	0.56	-1.3
3,589,275	+		PGA1_c34240	0.56	-2.6
3,589,283	-		PGA1_c34240	0.56	-2.5
3,589,310	+		PGA1_c34240	0.58	-1.6
3,589,310	+		PGA1_c34240	0.58	-1.9
3,589,310	+		PGA1_c34240	0.58	-2.4
3,589,310	+		PGA1_c34240	0.58	-2.0
3,589,399	+		PGA1_c34240	0.62	-2.1
3,589,399	+		PGA1_c34240	0.62	-1.4
3,589,399	+		PGA1_c34240	0.62	-2.9
3,589,399	+		PGA1_c34240	0.62	-1.8
3,589,407	-		PGA1_c34240	0.63	-1.9
3,589,407	-		PGA1_c34240	0.63	-2.9
3,589,407	-		PGA1_c34240	0.63	-2.4
3,589,407	-		PGA1_c34240	0.63	-4.7
3,589,407	-		PGA1_c34240	0.63	-3.0
3,589,454	+		PGA1_c34240	0.65	-3.3
3,589,542	-		PGA1_c34240	0.70	-3.0
3,589,581	+		PGA1_c34240	0.72	-3.6
3,589,581	+		PGA1_c34240	0.72	-2.1
3,589,637	-		PGA1_c34240	0.76	-3.2
3,589,668	-		PGA1_c34240	0.77	-2.4
3,589,728	-		PGA1_c34240	0.81	-3.3
3,589,852	-		PGA1_c34240	0.87	-0.8
3,589,872	-		PGA1_c34240	0.88	-1.4
3,590,022	-				-2.8
3,590,039	+				-1.5
3,590,047	-				-1.1
3,590,086	-				-2.7
3,590,105	+				-3.4
3,590,105	+				-1.8
3,590,129	+				-2.0
3,590,152	+				-2.2
3,590,157	-				-1.5
3,590,184	-				-2.0
3,590,231	+				-1.1
3,590,262	+				-3.3
3,590,262	-				-1.5
3,590,297	+				-3.1
3,590,297	+				-2.2
3,590,302	+		PGA1_c34250	0.10	-3.0
3,590,309	+		PGA1_c34250	0.11	-3.4
3,590,335	+		PGA1_c34250	0.12	-1.4
3,590,375	-		PGA1_c34250	0.15	-0.2
3,590,375	-		PGA1_c34250	0.15	-2.2
3,590,375	-		PGA1_c34250	0.15	-2.8
3,590,377	+		PGA1_c34250	0.15	-2.3
3,590,385	-		PGA1_c34250	0.16	-2.7
3,590,405	-		PGA1_c34250	0.17	-2.8
3,590,407	-		PGA1_c34250	0.17	-3.0
3,590,507	+		PGA1_c34250	0.24	-3.5
3,590,507	+		PGA1_c34250	0.24	-2.9
3,590,514	-		PGA1_c34250	0.24	-2.8
3,590,515	-		PGA1_c34250	0.24	-0.8
3,590,526	+		PGA1_c34250	0.25	-3.0
3,590,532	+		PGA1_c34250	0.26	-1.0
3,590,540	-		PGA1_c34250	0.26	-1.9
3,590,565	+		PGA1_c34250	0.28	-3.4
3,590,565	+		PGA1_c34250	0.28	-3.0
3,590,619	+		PGA1_c34250	0.31	-0.8
3,590,707	+		PGA1_c34250	0.37	-4.1
3,590,707	+		PGA1_c34250	0.37	-3.4
3,590,715	-		PGA1_c34250	0.38	-3.5
3,590,809	+		PGA1_c34250	0.44	-2.0
3,590,831	+		PGA1_c34250	0.46	-2.3
3,590,831	+		PGA1_c34250	0.46	-3.6
3,590,831	+		PGA1_c34250	0.46	-2.8
3,590,831	+		PGA1_c34250	0.46	-2.5
3,590,831	+		PGA1_c34250	0.46	-1.8
3,590,831	+		PGA1_c34250	0.46	-2.5
3,590,831	+		PGA1_c34250	0.46	-1.5
3,590,831	+		PGA1_c34250	0.46	-2.3
3,590,839	-		PGA1_c34250	0.46	-1.0
3,590,839	-		PGA1_c34250	0.46	-3.2
3,590,839	-		PGA1_c34250	0.46	-3.3
3,590,839	-		PGA1_c34250	0.46	-3.0
3,590,839	-		PGA1_c34250	0.46	-2.1
3,590,839	-		PGA1_c34250	0.46	-3.7
3,590,839	-		PGA1_c34250	0.46	-1.7
3,590,839	-		PGA1_c34250	0.46	-1.1
3,590,839	-		PGA1_c34250	0.46	+0.0
3,590,839	-		PGA1_c34250	0.46	-3.1
3,590,839	-		PGA1_c34250	0.46	-2.0
3,590,839	-		PGA1_c34250	0.46	-2.4
3,590,839	-		PGA1_c34250	0.46	-3.2
3,590,988	+		PGA1_c34250	0.56	-2.1
3,590,996	-		PGA1_c34250	0.57	-3.3
3,591,009	+		PGA1_c34250	0.58	-2.6
3,591,053	+		PGA1_c34250	0.61	-3.2