Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c31400

Experiment: Adenosine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Adenosine (N)
3,280,246	+		PGA1_c31390	0.43	-2.2
3,280,246	+		PGA1_c31390	0.43	-0.5
3,280,254	-		PGA1_c31390	0.43	-1.3
3,280,254	-		PGA1_c31390	0.43	+0.6
3,280,298	-		PGA1_c31390	0.46	-0.0
3,280,298	-		PGA1_c31390	0.46	+0.5
3,280,415	+		PGA1_c31390	0.55	-0.2
3,280,415	+		PGA1_c31390	0.55	+0.1
3,280,422	+		PGA1_c31390	0.55	-0.8
3,280,423	-		PGA1_c31390	0.55	+1.0
3,280,423	-		PGA1_c31390	0.55	-1.2
3,280,441	+		PGA1_c31390	0.56	+0.6
3,280,451	+		PGA1_c31390	0.57	+0.2
3,280,451	+		PGA1_c31390	0.57	-0.1
3,280,451	+		PGA1_c31390	0.57	-0.8
3,280,451	+		PGA1_c31390	0.57	-1.1
3,280,451	+		PGA1_c31390	0.57	-1.2
3,280,451	+		PGA1_c31390	0.57	+0.5
3,280,451	+		PGA1_c31390	0.57	+1.3
3,280,451	+		PGA1_c31390	0.57	-1.5
3,280,451	+		PGA1_c31390	0.57	+0.3
3,280,451	+		PGA1_c31390	0.57	-0.0
3,280,451	+		PGA1_c31390	0.57	+0.8
3,280,451	+		PGA1_c31390	0.57	-1.2
3,280,451	+		PGA1_c31390	0.57	-2.2
3,280,451	+		PGA1_c31390	0.57	-1.1
3,280,451	+		PGA1_c31390	0.57	+0.0
3,280,451	+		PGA1_c31390	0.57	+1.1
3,280,451	+		PGA1_c31390	0.57	+1.0
3,280,451	+		PGA1_c31390	0.57	+1.0
3,280,451	+		PGA1_c31390	0.57	-1.2
3,280,451	+		PGA1_c31390	0.57	-1.5
3,280,456	+		PGA1_c31390	0.57	+0.1
3,280,459	-		PGA1_c31390	0.58	-2.0
3,280,459	-		PGA1_c31390	0.58	+0.3
3,280,459	-		PGA1_c31390	0.58	-1.4
3,280,459	-		PGA1_c31390	0.58	+0.3
3,280,459	-		PGA1_c31390	0.58	+0.3
3,280,459	-		PGA1_c31390	0.58	+0.9
3,280,459	-		PGA1_c31390	0.58	+0.2
3,280,459	-		PGA1_c31390	0.58	-0.8
3,280,459	-		PGA1_c31390	0.58	+0.6
3,280,459	-		PGA1_c31390	0.58	-0.4
3,280,461	+		PGA1_c31390	0.58	+0.7
3,280,461	+		PGA1_c31390	0.58	+1.3
3,280,469	-		PGA1_c31390	0.58	-1.1
3,280,469	-		PGA1_c31390	0.58	+0.8
3,280,522	+		PGA1_c31390	0.62	+0.5
3,280,530	+		PGA1_c31390	0.63	+1.7
3,280,538	-		PGA1_c31390	0.63	-1.5
3,280,538	-		PGA1_c31390	0.63	+0.0
3,280,551	+		PGA1_c31390	0.64	+0.3
3,280,650	+		PGA1_c31390	0.71	+0.4
3,280,658	-		PGA1_c31390	0.72	+1.5
3,280,664	+		PGA1_c31390	0.72	+0.2
3,280,675	-		PGA1_c31390	0.73	-0.8
3,280,675	-		PGA1_c31390	0.73	-2.2
3,280,722	+		PGA1_c31390	0.76	-1.7
3,280,730	-		PGA1_c31390	0.77	+0.0
3,280,730	-		PGA1_c31390	0.77	-0.2
3,280,786	+		PGA1_c31390	0.81	+0.7
3,280,786	+		PGA1_c31390	0.81	-1.5
3,280,786	+		PGA1_c31390	0.81	-3.2
3,280,786	+		PGA1_c31390	0.81	+1.3
3,280,794	-		PGA1_c31390	0.81	-0.2
3,280,794	-		PGA1_c31390	0.81	-1.7
3,280,799	-		PGA1_c31390	0.82	-0.3
3,280,828	-		PGA1_c31390	0.84	+0.0
3,280,843	-		PGA1_c31390	0.85	+0.8
3,280,843	-		PGA1_c31390	0.85	+1.3
3,280,843	-		PGA1_c31390	0.85	-0.3
3,280,855	+		PGA1_c31390	0.86	-0.2
3,280,858	+		PGA1_c31390	0.86	+0.1
3,280,871	+		PGA1_c31390	0.87	+0.3
3,280,879	-		PGA1_c31390	0.87	-1.2
3,280,879	-		PGA1_c31390	0.87	+2.7
3,280,942	-				+0.1
3,280,947	-				+0.8
3,280,969	+				+0.2
3,280,974	+				+2.4
3,280,994	+				+1.1
3,281,016	+				-0.6
3,281,024	-				-0.0
3,281,048	+				+0.8
3,281,048	+				+0.4
3,281,058	+				-0.3
3,281,086	-				+0.2
3,281,086	-				-0.1
3,281,105	-				-2.2
3,281,141	+				-1.5
3,281,185	+				-2.5
3,281,186	-				-0.9
3,281,226	+				-1.2
3,281,226	+				+0.1
3,281,226	+				+0.2
3,281,234	-				-1.4
3,281,287	+		PGA1_c31400	0.12	+0.5
3,281,344	-		PGA1_c31400	0.20	+0.8
3,281,346	+		PGA1_c31400	0.20	+0.3
3,281,370	-		PGA1_c31400	0.23	-0.3
3,281,404	-		PGA1_c31400	0.28	-1.3
3,281,414	-		PGA1_c31400	0.29	-0.5
3,281,419	+		PGA1_c31400	0.30	+0.5
3,281,487	-		PGA1_c31400	0.38	+0.5
3,281,494	+		PGA1_c31400	0.39	-1.5
3,281,502	-		PGA1_c31400	0.40	+0.5
3,281,502	-		PGA1_c31400	0.40	+0.1
3,281,586	-		PGA1_c31400	0.51	-2.5
3,281,617	+		PGA1_c31400	0.55	-3.3
3,281,617	+		PGA1_c31400	0.55	-0.1
3,281,625	-		PGA1_c31400	0.56	+1.5
3,281,686	+		PGA1_c31400	0.64	+0.7
3,281,696	-		PGA1_c31400	0.65	-1.0
3,281,733	+		PGA1_c31400	0.70	-0.1
3,281,734	+		PGA1_c31400	0.70	-1.5
3,281,762	+		PGA1_c31400	0.74	+0.3
3,281,762	+		PGA1_c31400	0.74	-1.6
3,281,770	-		PGA1_c31400	0.75	-1.1
3,281,770	-		PGA1_c31400	0.75	-0.6
3,281,770	-		PGA1_c31400	0.75	-2.9
3,281,770	-		PGA1_c31400	0.75	-1.4
3,281,777	-		PGA1_c31400	0.76	-0.2
3,281,832	+		PGA1_c31400	0.83	+0.9
3,281,832	+		PGA1_c31400	0.83	-1.2
3,281,897	+				+0.2
3,281,916	+				-0.7
3,281,924	-				-0.7
3,281,924	-				+0.9
3,281,961	+				-0.9
3,281,961	+				+1.2
3,281,961	+				-0.7
3,281,961	+				-2.0
3,281,961	+				+0.3
3,281,961	+				+1.9
3,281,961	+				+0.9
3,281,969	+				+1.2
3,281,969	-				+1.3
3,281,969	-				-0.1
3,281,969	-				-1.5
3,281,971	+				-0.8
3,281,971	+				-2.1
3,281,979	-				-0.8
3,281,986	-				+0.7
3,282,031	-				-1.4
3,282,031	-				-0.5
3,282,036	+				-0.1
3,282,036	+				+0.9
3,282,036	+				+0.9
3,282,041	+				-0.6
3,282,044	-				-0.4
3,282,046	+				+0.5
3,282,049	-				+1.1
3,282,054	-				-0.9
3,282,094	-				-0.1
3,282,125	+				-0.7
3,282,148	+				-0.5
3,282,156	-				-0.2
3,282,217	+				-0.7
3,282,225	-		PGA1_c31410	0.10	-1.0
3,282,225	-		PGA1_c31410	0.10	-2.1
3,282,225	-		PGA1_c31410	0.10	-0.8
3,282,225	-		PGA1_c31410	0.10	-1.5
3,282,236	-		PGA1_c31410	0.11	-0.2
3,282,249	+		PGA1_c31410	0.12	+0.1
3,282,285	+		PGA1_c31410	0.15	+0.3
3,282,285	+		PGA1_c31410	0.15	+0.9
3,282,290	-		PGA1_c31410	0.16	-1.2
3,282,293	-		PGA1_c31410	0.16	-1.6
3,282,334	+		PGA1_c31410	0.19	+0.7
3,282,334	+		PGA1_c31410	0.19	+0.3
3,282,334	+		PGA1_c31410	0.19	-0.4
3,282,334	+		PGA1_c31410	0.19	-0.9
3,282,334	+		PGA1_c31410	0.19	-0.8
3,282,334	+		PGA1_c31410	0.19	+0.6
3,282,334	+		PGA1_c31410	0.19	-1.8
3,282,342	-		PGA1_c31410	0.20	-3.2
3,282,342	-		PGA1_c31410	0.20	-0.2
3,282,378	-		PGA1_c31410	0.23	+0.8
3,282,379	-		PGA1_c31410	0.23	-0.6
3,282,379	-		PGA1_c31410	0.23	+1.1
3,282,409	+		PGA1_c31410	0.26	+0.3
3,282,422	-		PGA1_c31410	0.27	-0.0
3,282,422	-		PGA1_c31410	0.27	+0.3
3,282,422	-		PGA1_c31410	0.27	-0.5
3,282,430	+		PGA1_c31410	0.28	-0.9
3,282,484	-		PGA1_c31410	0.32	+0.6
3,282,546	+		PGA1_c31410	0.37	+1.1
3,282,546	+		PGA1_c31410	0.37	+0.1
3,282,546	+		PGA1_c31410	0.37	-0.1
3,282,551	-		PGA1_c31410	0.38	+0.4
3,282,562	+		PGA1_c31410	0.39	-1.2
3,282,616	+		PGA1_c31410	0.43	-0.1
3,282,616	+		PGA1_c31410	0.43	-0.0
3,282,624	-		PGA1_c31410	0.44	+0.2
3,282,624	-		PGA1_c31410	0.44	-2.5
3,282,624	-		PGA1_c31410	0.44	+1.3
3,282,624	-		PGA1_c31410	0.44	+0.3
3,282,707	+		PGA1_c31410	0.51	-0.5
3,282,798	-		PGA1_c31410	0.59	+0.5
3,282,811	+		PGA1_c31410	0.60	-2.3
3,282,844	-		PGA1_c31410	0.62	-1.0
3,282,844	-		PGA1_c31410	0.62	-1.7
3,282,888	+		PGA1_c31410	0.66	-1.1
3,282,907	+		PGA1_c31410	0.68	-1.7
3,282,939	+		PGA1_c31410	0.70	-1.5
3,282,939	+		PGA1_c31410	0.70	-0.2
3,282,947	-		PGA1_c31410	0.71	+0.8
3,282,952	-		PGA1_c31410	0.72	-0.1