Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1626

Experiment: BG11 with Chloride 15.625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Chloride 15.625 mM
1,694,072	+		Synpcc7942_1625	0.31	-0.3
1,694,124	+		Synpcc7942_1625	0.35	+0.0
1,694,124	+		Synpcc7942_1625	0.35	-0.8
1,694,147	+				+1.7
1,694,189	+		Synpcc7942_1625	0.40	-1.7
1,694,270	-		Synpcc7942_1625	0.47	+0.4
1,694,314	-		Synpcc7942_1625	0.50	-2.0
1,694,344	+		Synpcc7942_1625	0.53	-2.1
1,694,344	+		Synpcc7942_1625	0.53	-0.9
1,694,387	-		Synpcc7942_1625	0.56	+0.4
1,694,397	-		Synpcc7942_1625	0.57	-0.5
1,694,453	-		Synpcc7942_1625	0.62	+0.1
1,694,505	-		Synpcc7942_1625	0.66	+1.0
1,694,514	+		Synpcc7942_1625	0.67	+0.1
1,694,581	-		Synpcc7942_1625	0.72	-0.3
1,694,583	+		Synpcc7942_1625	0.72	+0.1
1,694,656	-		Synpcc7942_1625	0.78	+1.0
1,694,675	+		Synpcc7942_1625	0.80	-0.3
1,694,683	-		Synpcc7942_1625	0.80	-0.5
1,694,727	+		Synpcc7942_1625	0.84	-0.6
1,694,734	+				+0.7
1,694,734	+		Synpcc7942_1625	0.85	+0.4
1,694,735	+		Synpcc7942_1625	0.85	-0.6
1,694,747	+		Synpcc7942_1625	0.86	-1.5
1,694,747	+		Synpcc7942_1625	0.86	+0.6
1,694,766	-		Synpcc7942_1625	0.87	-4.7
1,694,770	+		Synpcc7942_1625	0.88	-1.1
1,694,778	-		Synpcc7942_1625	0.88	+0.4
1,694,788	+		Synpcc7942_1625	0.89	-0.0
1,694,791	-		Synpcc7942_1625	0.89	-1.0
1,694,833	+				-0.2
1,694,840	+				-0.7
1,694,840	+				-1.1
1,694,841	-				+0.4
1,694,855	-				-1.6
1,694,895	+				+0.4
1,694,924	+				-1.5
1,694,953	+				-1.1
1,694,961	-				-0.0
1,694,961	-				-0.8
1,694,961	-				+0.1
1,694,961	-				-1.1
1,694,974	+				-0.4
1,694,996	+				+0.0
1,694,997	-				+0.1
1,694,997	-				-0.7
1,695,001	+				+0.7
1,695,009	-				+0.2
1,695,035	+				-1.4
1,695,035	+				+0.7
1,695,035	+				-0.0
1,695,035	+				-0.6
1,695,042	+				+0.7
1,695,043	-				+0.2
1,695,045	-				-0.6
1,695,066	+				-1.2
1,695,066	+				-1.5
1,695,066	+				-1.3
1,695,074	-				+0.1
1,695,074	-				-2.2
1,695,076	+				-0.7
1,695,079	-				-1.2
1,695,080	+				-0.1
1,695,106	+				-0.5
1,695,106	+				+1.4
1,695,106	+				-1.5
1,695,114	-				-1.3
1,695,114	-				-0.2
1,695,114	-				-1.1
1,695,114	-				-0.8
1,695,126	-		Synpcc7942_1626	0.12	-2.0
1,695,152	+		Synpcc7942_1626	0.17	+0.4
1,695,160	-		Synpcc7942_1626	0.19	-2.9
1,695,179	-		Synpcc7942_1626	0.23	-0.8
1,695,179	-		Synpcc7942_1626	0.23	-2.4
1,695,221	+		Synpcc7942_1626	0.32	-2.1
1,695,221	+		Synpcc7942_1626	0.32	-1.5
1,695,222	-		Synpcc7942_1626	0.32	-1.0
1,695,222	-		Synpcc7942_1626	0.32	+0.6
1,695,272	-		Synpcc7942_1626	0.42	-0.8
1,695,278	+		Synpcc7942_1626	0.43	-0.5
1,695,284	+		Synpcc7942_1626	0.45	-1.3
1,695,292	-		Synpcc7942_1626	0.46	-0.5
1,695,292	-		Synpcc7942_1626	0.46	-2.1
1,695,292	-		Synpcc7942_1626	0.46	-1.2
1,695,296	+		Synpcc7942_1626	0.47	+0.4
1,695,302	-		Synpcc7942_1626	0.48	-1.0
1,695,308	+		Synpcc7942_1626	0.50	-0.8
1,695,308	+		Synpcc7942_1626	0.50	-0.3
1,695,333	-		Synpcc7942_1626	0.55	-0.3
1,695,348	+		Synpcc7942_1626	0.58	-1.0
1,695,366	-		Synpcc7942_1626	0.62	-0.8
1,695,380	+		Synpcc7942_1626	0.65	+0.0
1,695,383	-		Synpcc7942_1626	0.65	+0.1
1,695,392	+		Synpcc7942_1626	0.67	-1.3
1,695,419	-		Synpcc7942_1626	0.73	-0.3
1,695,455	-		Synpcc7942_1626	0.80	-1.2
1,695,456	+		Synpcc7942_1626	0.80	-0.5
1,695,475	-		Synpcc7942_1626	0.84	-1.4
1,695,485	+		Synpcc7942_1626	0.86	-3.9
1,695,493	-		Synpcc7942_1626	0.88	-1.1
1,695,493	-		Synpcc7942_1626	0.88	-2.6
1,695,513	+				-0.2
1,695,513	+				-0.2
1,695,523	-				-2.6
1,695,523	-				+0.7
1,695,627	-				-1.4
1,695,636	+				-0.2
1,695,639	-				-0.8
1,695,640	-				-1.3
1,695,649	-				+0.4
1,695,656	+				-2.2
1,695,707	-		Synpcc7942_1627	0.12	+0.7
1,695,723	+				+2.7
1,695,733	+		Synpcc7942_1627	0.14	+0.7
1,695,738	+		Synpcc7942_1627	0.14	-1.3
1,695,746	-		Synpcc7942_1627	0.15	+0.4
1,695,756	-		Synpcc7942_1627	0.16	-1.2
1,695,761	+		Synpcc7942_1627	0.16	-0.1
1,695,761	+		Synpcc7942_1627	0.16	+0.9
1,695,761	+		Synpcc7942_1627	0.16	-3.2
1,695,761	+		Synpcc7942_1627	0.16	-2.1
1,695,761	+		Synpcc7942_1627	0.16	+1.1
1,695,764	-		Synpcc7942_1627	0.16	-1.5
1,695,764	-		Synpcc7942_1627	0.16	-1.5
1,695,764	-		Synpcc7942_1627	0.16	-1.5
1,695,769	-		Synpcc7942_1627	0.17	-0.9
1,695,769	-		Synpcc7942_1627	0.17	-1.7
1,695,769	-		Synpcc7942_1627	0.17	-1.6
1,695,769	-		Synpcc7942_1627	0.17	-2.4
1,695,769	-		Synpcc7942_1627	0.17	+0.9
1,695,821	+		Synpcc7942_1627	0.21	-0.9
1,695,826	+		Synpcc7942_1627	0.21	+0.4
1,695,826	+		Synpcc7942_1627	0.21	-1.6
1,695,827	+		Synpcc7942_1627	0.21	-1.3
1,695,835	-		Synpcc7942_1627	0.22	+0.2
1,695,835	-		Synpcc7942_1627	0.22	-0.8
1,695,845	+		Synpcc7942_1627	0.22	-1.2
1,695,852	+		Synpcc7942_1627	0.23	-1.6
1,695,857	+		Synpcc7942_1627	0.23	+1.7
1,695,862	+		Synpcc7942_1627	0.24	-1.3
1,695,879	-		Synpcc7942_1627	0.25	-1.5
1,695,879	-		Synpcc7942_1627	0.25	-3.3
1,695,881	+		Synpcc7942_1627	0.25	-1.0
1,695,927	+		Synpcc7942_1627	0.29	-2.5
1,695,932	-		Synpcc7942_1627	0.29	-3.0
1,695,960	+		Synpcc7942_1627	0.31	-1.2
1,695,971	+		Synpcc7942_1627	0.32	-3.8
1,695,979	-		Synpcc7942_1627	0.33	+0.3
1,695,993	-		Synpcc7942_1627	0.34	-1.7
1,695,993	-		Synpcc7942_1627	0.34	-1.0
1,696,007	+		Synpcc7942_1627	0.35	+0.0
1,696,007	+		Synpcc7942_1627	0.35	-2.4
1,696,028	-		Synpcc7942_1627	0.36	-0.6
1,696,039	-		Synpcc7942_1627	0.37	-2.2
1,696,062	-		Synpcc7942_1627	0.39	-2.7
1,696,063	+		Synpcc7942_1627	0.39	-2.1
1,696,082	+		Synpcc7942_1627	0.41	-1.9
1,696,151	+		Synpcc7942_1627	0.46	+1.4
1,696,165	+		Synpcc7942_1627	0.47	-0.5
1,696,183	+				+2.7
1,696,183	+		Synpcc7942_1627	0.48	-3.0
1,696,191	-		Synpcc7942_1627	0.49	+0.4
1,696,200	+		Synpcc7942_1627	0.50	-1.5
1,696,203	-		Synpcc7942_1627	0.50	-1.1
1,696,211	+		Synpcc7942_1627	0.51	-1.5
1,696,213	-		Synpcc7942_1627	0.51	-1.3
1,696,242	+		Synpcc7942_1627	0.53	-2.2
1,696,298	-		Synpcc7942_1627	0.57	-4.4
1,696,300	+		Synpcc7942_1627	0.57	-0.1
1,696,367	-		Synpcc7942_1627	0.63	-4.0
1,696,378	+		Synpcc7942_1627	0.63	-2.5
1,696,455	-		Synpcc7942_1627	0.69	-2.1
1,696,460	-		Synpcc7942_1627	0.70	-2.0
1,696,492	+		Synpcc7942_1627	0.72	-3.0
1,696,537	-		Synpcc7942_1627	0.76	-1.8