Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS11065

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
2,494,479	-		HSERO_RS11060	0.79	-0.5
2,495,028	-		HSERO_RS11065	0.16	-4.1
2,495,191	+		HSERO_RS11065	0.31	-1.7
2,495,394	-		HSERO_RS11065	0.49	-2.0
2,495,516	-		HSERO_RS11065	0.59	-3.6
2,495,869	+				-1.0
2,496,126	-		HSERO_RS11070	0.16	-2.6
2,496,217	+		HSERO_RS11070	0.26	-3.7
2,496,482	-		HSERO_RS11070	0.56	-3.4
2,496,601	-		HSERO_RS11070	0.69	-1.4
2,496,624	+		HSERO_RS11070	0.71	-2.7
2,496,651	+		HSERO_RS11070	0.74	-5.4
2,496,947	-				+0.3