Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36060

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,539,635	+		RR42_RS36055	0.46	+2.0
3,539,635	+		RR42_RS36055	0.46	-0.6
3,539,635	+		RR42_RS36055	0.46	+0.6
3,539,635	+		RR42_RS36055	0.46	+1.1
3,539,635	+		RR42_RS36055	0.46	+0.3
3,539,636	-		RR42_RS36055	0.46	-1.1
3,539,636	-		RR42_RS36055	0.46	-2.3
3,539,641	+		RR42_RS36055	0.47	-1.5
3,539,641	+		RR42_RS36055	0.47	-1.0
3,539,641	+		RR42_RS36055	0.47	-1.5
3,539,641	+		RR42_RS36055	0.47	+0.1
3,539,641	+		RR42_RS36055	0.47	+0.5
3,539,642	-		RR42_RS36055	0.47	-1.7
3,539,815	+		RR42_RS36055	0.65	-2.3
3,539,816	-		RR42_RS36055	0.65	+0.2
3,539,816	-		RR42_RS36055	0.65	+1.1
3,539,824	+		RR42_RS36055	0.66	+0.9
3,539,825	-		RR42_RS36055	0.66	+0.2
3,539,825	-		RR42_RS36055	0.66	-0.7
3,539,825	-		RR42_RS36055	0.66	+0.2
3,539,825	-		RR42_RS36055	0.66	-0.4
3,539,825	-		RR42_RS36055	0.66	-0.4
3,539,939	-		RR42_RS36055	0.78	-0.5
3,539,939	-		RR42_RS36055	0.78	-0.5
3,540,115	+				-0.7
3,540,235	-				+1.5
3,540,235	-				+2.3
3,540,482	-				+0.2
3,540,652	-				-0.4
3,540,652	-				-0.5
3,540,851	-		RR42_RS36060	0.21	+0.1
3,541,522	+		RR42_RS36060	0.68	-2.4
3,541,522	+		RR42_RS36060	0.68	-0.3
3,541,523	-		RR42_RS36060	0.68	-0.6
3,541,523	-		RR42_RS36060	0.68	+0.1
3,541,523	-		RR42_RS36060	0.68	-0.3
3,541,676	-		RR42_RS36060	0.79	-0.8
3,541,764	+		RR42_RS36060	0.85	+0.4
3,541,764	+		RR42_RS36060	0.85	-0.2
3,541,765	-		RR42_RS36060	0.86	-0.1
3,541,765	-		RR42_RS36060	0.86	+0.4
3,541,768	+		RR42_RS36060	0.86	+0.1
3,541,768	+		RR42_RS36060	0.86	+1.8
3,541,768	+		RR42_RS36060	0.86	-2.6
3,541,768	+		RR42_RS36060	0.86	+2.1
3,541,769	-		RR42_RS36060	0.86	+0.3
3,541,769	-		RR42_RS36060	0.86	-0.1
3,541,793	-		RR42_RS36060	0.87	+0.3
3,541,886	-				-0.5
3,541,886	-				+0.3
3,541,966	+				-1.0
3,541,966	+				+1.3
3,541,967	-				-1.7
3,542,345	+		RR42_RS36065	0.23	+0.7
3,542,373	-		RR42_RS36065	0.25	-0.8
3,542,374	+		RR42_RS36065	0.26	+0.4
3,542,375	-		RR42_RS36065	0.26	-0.2
3,542,586	-		RR42_RS36065	0.48	-0.2
3,542,658	+		RR42_RS36065	0.55	-0.0
3,542,659	-		RR42_RS36065	0.55	+0.1
3,542,659	-		RR42_RS36065	0.55	+0.2