Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36050

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,537,835	+				+0.9
3,537,835	+				+1.1
3,537,851	-				-2.2
3,537,913	+				-0.5
3,538,387	-		RR42_RS36045	0.41	-0.1
3,538,425	+		RR42_RS36045	0.46	+0.8
3,538,426	-		RR42_RS36045	0.46	-1.7
3,538,494	+		RR42_RS36045	0.55	+1.6
3,538,494	+		RR42_RS36045	0.55	+0.0
3,538,551	+		RR42_RS36045	0.62	+0.7
3,538,552	-		RR42_RS36045	0.62	+1.6
3,538,552	-		RR42_RS36045	0.62	+1.9
3,538,571	-		RR42_RS36045	0.65	+1.7
3,538,571	-		RR42_RS36045	0.65	+0.7
3,538,599	+		RR42_RS36045	0.68	+1.2
3,538,600	-		RR42_RS36045	0.68	-0.6
3,538,602	+		RR42_RS36045	0.68	+0.2
3,538,647	+		RR42_RS36045	0.74	+2.6
3,538,667	-		RR42_RS36045	0.77	+1.3
3,538,793	+				+0.5
3,538,917	+		RR42_RS36050	0.47	-3.6
3,538,953	+		RR42_RS36050	0.65	+0.3
3,539,009	+				-0.2
3,539,010	-				+0.5
3,539,105	+				-1.8
3,539,106	-				-1.4
3,539,106	-				+0.6
3,539,106	-				-0.0
3,539,325	+		RR42_RS36055	0.14	+0.9
3,539,440	+		RR42_RS36055	0.26	-1.9
3,539,441	-		RR42_RS36055	0.26	+0.1
3,539,488	-		RR42_RS36055	0.31	-0.8
3,539,635	+		RR42_RS36055	0.46	+2.0
3,539,635	+		RR42_RS36055	0.46	-0.6
3,539,635	+		RR42_RS36055	0.46	+0.6
3,539,635	+		RR42_RS36055	0.46	+1.1
3,539,635	+		RR42_RS36055	0.46	+0.3
3,539,636	-		RR42_RS36055	0.46	-1.1
3,539,636	-		RR42_RS36055	0.46	-2.3
3,539,641	+		RR42_RS36055	0.47	-1.5
3,539,641	+		RR42_RS36055	0.47	-1.0
3,539,641	+		RR42_RS36055	0.47	-1.5
3,539,641	+		RR42_RS36055	0.47	+0.1
3,539,641	+		RR42_RS36055	0.47	+0.5
3,539,642	-		RR42_RS36055	0.47	-1.7
3,539,815	+		RR42_RS36055	0.65	-2.3
3,539,816	-		RR42_RS36055	0.65	+0.2
3,539,816	-		RR42_RS36055	0.65	+1.1
3,539,824	+		RR42_RS36055	0.66	+0.9
3,539,825	-		RR42_RS36055	0.66	+0.2
3,539,825	-		RR42_RS36055	0.66	-0.7
3,539,825	-		RR42_RS36055	0.66	+0.2
3,539,825	-		RR42_RS36055	0.66	-0.4
3,539,825	-		RR42_RS36055	0.66	-0.4
3,539,939	-		RR42_RS36055	0.78	-0.5
3,539,939	-		RR42_RS36055	0.78	-0.5