Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35865

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,492,832	+		RR42_RS35860	0.57	+0.6
3,492,883	+		RR42_RS35860	0.59	-2.7
3,492,993	+		RR42_RS35860	0.65	-1.0
3,492,994	-		RR42_RS35860	0.65	-1.1
3,492,994	-		RR42_RS35860	0.65	-0.6
3,492,994	-		RR42_RS35860	0.65	-1.2
3,492,994	-		RR42_RS35860	0.65	-1.0
3,493,623	-				-0.2
3,493,623	-				-2.7
3,493,623	-				-0.2
3,493,688	-				-2.0
3,494,776	+		RR42_RS35865	0.55	-1.7
3,494,777	-		RR42_RS35865	0.55	-2.5
3,494,826	-		RR42_RS35865	0.58	-0.9
3,494,826	-		RR42_RS35865	0.58	-0.6
3,494,826	-		RR42_RS35865	0.58	-1.8
3,495,259	-		RR42_RS35865	0.82	-0.7
3,495,293	+		RR42_RS35865	0.84	-1.7
3,495,293	+		RR42_RS35865	0.84	-0.2
3,495,294	-		RR42_RS35865	0.84	-1.1
3,495,424	+				+1.0
3,495,429	+				-0.4
3,495,429	+				+0.0
3,495,429	+				+0.3
3,495,430	-				+0.3
3,495,430	-				-1.4
3,495,430	-				-2.4
3,495,430	-				-1.5
3,495,430	-				-1.8
3,495,430	-				+1.3
3,495,430	-				+0.1
3,495,430	-				-0.8
3,495,430	-				-0.3
3,495,430	-				-0.3
3,495,468	+				-3.3
3,495,468	+				+2.6
3,495,469	-				+2.3
3,495,469	-				-0.8
3,495,469	-				-1.5
3,495,469	-				-1.9
3,495,469	-				+0.3
3,495,547	+				+0.6
3,495,547	+				-0.1
3,495,548	-				-1.9
3,495,548	-				-2.2
3,495,554	-				-1.0
3,495,554	-				-0.8
3,495,583	-				+0.1
3,495,653	+				+0.7
3,495,771	+				-1.0
3,495,771	+				+2.2
3,495,772	-				-2.2
3,495,772	-				-2.0
3,495,772	-				-0.1
3,495,777	+				+0.9
3,495,777	+				-0.6
3,495,777	+				-1.9
3,495,777	+				-0.0
3,495,777	+				-1.4
3,495,778	-				-1.6
3,495,778	-				-1.5
3,495,778	-				-2.3
3,495,778	-				-4.1
3,495,778	-				-1.0
3,495,778	-				+0.3
3,495,778	-				-2.2
3,495,778	-				-3.7
3,495,778	-				-2.1
3,495,867	+				-1.4
3,495,867	+				+0.3
3,495,867	+				-1.5
3,495,867	+				-0.8
3,495,868	-				-0.4
3,495,868	-				-1.2
3,495,868	-				-2.2
3,495,868	-				-0.9
3,495,868	-				-2.7
3,495,868	-				-2.3
3,495,977	-				-1.8
3,495,977	-				+0.7
3,496,093	+				-2.3
3,496,094	-				-1.5
3,496,140	-				-0.1
3,496,266	+				+0.6
3,496,267	-				-0.9
3,496,346	-				-1.5
3,496,346	-				-0.6
3,496,389	+				-1.3