Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35860

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,490,755	+				-0.1
3,490,755	+				-1.5
3,490,755	+				-0.8
3,490,826	+				+0.1
3,490,826	+				-0.5
3,490,826	+				-0.9
3,490,826	+				+1.0
3,490,827	-				-1.0
3,490,827	-				-0.4
3,490,827	-				-0.6
3,490,827	-				-0.3
3,490,827	-				-1.4
3,490,827	-				-0.2
3,490,829	+				+1.3
3,490,830	-				-1.5
3,490,830	-				+0.3
3,490,830	-				+0.8
3,490,830	-				-0.5
3,490,906	+				+0.4
3,490,906	+				-0.3
3,490,907	-				+1.3
3,490,907	-				-0.7
3,490,907	-				+0.1
3,491,131	-		RR42_RS35855	0.27	-0.4
3,491,131	-		RR42_RS35855	0.27	+0.5
3,491,432	+		RR42_RS35855	0.67	-1.0
3,491,432	+		RR42_RS35855	0.67	+0.0
3,491,433	-		RR42_RS35855	0.68	-0.2
3,491,433	-		RR42_RS35855	0.68	+0.3
3,491,433	-		RR42_RS35855	0.68	-3.4
3,491,433	-		RR42_RS35855	0.68	+0.2
3,491,488	+		RR42_RS35855	0.75	-0.2
3,491,488	+		RR42_RS35855	0.75	+0.6
3,491,489	-		RR42_RS35855	0.75	-0.1
3,491,489	-		RR42_RS35855	0.75	+0.1
3,491,563	+		RR42_RS35855	0.85	-0.3
3,491,564	-		RR42_RS35855	0.85	-0.4
3,491,779	-				-0.7
3,491,983	-		RR42_RS35860	0.13	+0.3
3,491,997	+		RR42_RS35860	0.14	+0.5
3,492,159	+		RR42_RS35860	0.22	+1.3
3,492,518	+		RR42_RS35860	0.41	+1.0
3,492,518	+		RR42_RS35860	0.41	-1.9
3,492,518	+		RR42_RS35860	0.41	-0.7
3,492,519	-		RR42_RS35860	0.41	+0.1
3,492,519	-		RR42_RS35860	0.41	+0.6
3,492,613	-		RR42_RS35860	0.46	-0.3
3,492,613	-		RR42_RS35860	0.46	-1.9
3,492,613	-		RR42_RS35860	0.46	-0.5
3,492,832	+		RR42_RS35860	0.57	+0.6
3,492,883	+		RR42_RS35860	0.59	-2.7
3,492,993	+		RR42_RS35860	0.65	-1.0
3,492,994	-		RR42_RS35860	0.65	-1.1
3,492,994	-		RR42_RS35860	0.65	-0.6
3,492,994	-		RR42_RS35860	0.65	-1.2
3,492,994	-		RR42_RS35860	0.65	-1.0
3,493,623	-				-0.2
3,493,623	-				-2.7
3,493,623	-				-0.2
3,493,688	-				-2.0