Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35500

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,414,874	-		RR42_RS35495	0.39	-0.5
3,414,927	+		RR42_RS35495	0.43	+0.6
3,415,117	-		RR42_RS35495	0.56	-0.7
3,415,136	-		RR42_RS35495	0.58	-1.5
3,415,136	-		RR42_RS35495	0.58	+0.1
3,415,205	+		RR42_RS35495	0.63	-2.6
3,415,214	-		RR42_RS35495	0.63	-0.8
3,415,214	-		RR42_RS35495	0.63	-0.6
3,415,287	+		RR42_RS35495	0.68	-0.1
3,415,288	-		RR42_RS35495	0.68	+0.4
3,415,328	-		RR42_RS35495	0.71	-3.8
3,415,736	+				-0.9
3,415,736	+				+0.1
3,415,736	+				+2.6
3,415,736	+				+0.3
3,415,737	-				+0.8
3,415,904	+				-0.5
3,415,905	-				+1.0
3,415,976	+		RR42_RS35500	0.13	-2.2
3,415,995	+		RR42_RS35500	0.15	+0.4
3,415,996	-		RR42_RS35500	0.15	-2.4
3,416,332	+		RR42_RS35500	0.50	-3.6
3,416,405	+		RR42_RS35500	0.58	-1.0
3,416,405	+		RR42_RS35500	0.58	+1.6
3,416,406	-		RR42_RS35500	0.58	+0.5
3,416,475	+		RR42_RS35500	0.66	+0.7
3,416,475	+		RR42_RS35500	0.66	+0.4
3,416,476	-		RR42_RS35500	0.66	+0.1
3,416,476	-		RR42_RS35500	0.66	+0.3
3,416,590	-		RR42_RS35500	0.78	+1.5
3,416,590	-		RR42_RS35500	0.78	-0.1
3,416,889	+				+0.7
3,416,889	+				+0.3
3,417,064	+				+1.2
3,417,178	+		RR42_RS35505	0.12	+1.6
3,417,178	+		RR42_RS35505	0.12	-0.2
3,417,292	+		RR42_RS35505	0.16	+0.5
3,417,293	-		RR42_RS35505	0.16	+0.6
3,417,339	+		RR42_RS35505	0.17	-0.2
3,417,339	+		RR42_RS35505	0.17	+2.1
3,417,340	-		RR42_RS35505	0.17	+1.1
3,417,340	-		RR42_RS35505	0.17	-0.6
3,417,340	-		RR42_RS35505	0.17	+0.4
3,417,361	-		RR42_RS35505	0.18	-2.0
3,417,595	+		RR42_RS35505	0.25	+0.7
3,417,595	+		RR42_RS35505	0.25	+0.6
3,417,595	+		RR42_RS35505	0.25	+1.7
3,417,596	-		RR42_RS35505	0.25	-0.9
3,417,728	-		RR42_RS35505	0.30	+1.1
3,417,728	-		RR42_RS35505	0.30	+0.5