Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35220

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,353,395	+		RR42_RS35215	0.23	-0.3
3,353,395	+		RR42_RS35215	0.23	-0.2
3,353,416	+		RR42_RS35215	0.26	+1.3
3,353,417	-		RR42_RS35215	0.26	-1.0
3,353,417	-		RR42_RS35215	0.26	-0.8
3,353,417	-		RR42_RS35215	0.26	-0.7
3,353,418	+		RR42_RS35215	0.26	+0.8
3,353,419	-		RR42_RS35215	0.26	-1.7
3,353,519	+		RR42_RS35215	0.36	+0.2
3,353,519	+		RR42_RS35215	0.36	-1.4
3,353,519	+		RR42_RS35215	0.36	-0.3
3,353,520	-		RR42_RS35215	0.36	-2.9
3,353,521	+		RR42_RS35215	0.36	+0.1
3,353,522	-		RR42_RS35215	0.36	-1.0
3,353,522	-		RR42_RS35215	0.36	+0.4
3,353,522	-		RR42_RS35215	0.36	+1.3
3,353,584	-		RR42_RS35215	0.43	-1.5
3,353,705	+		RR42_RS35215	0.55	-0.7
3,353,706	-		RR42_RS35215	0.55	+0.1
3,353,707	+		RR42_RS35215	0.55	+0.5
3,353,707	+		RR42_RS35215	0.55	-0.4
3,353,707	+		RR42_RS35215	0.55	-0.5
3,353,708	-		RR42_RS35215	0.55	+0.6
3,353,854	+		RR42_RS35215	0.70	-1.0
3,354,045	+		RR42_RS35215	0.89	+0.8
3,354,483	-		RR42_RS35220	0.30	-2.2
3,354,483	-		RR42_RS35220	0.30	+1.5
3,354,506	+		RR42_RS35220	0.32	+1.7
3,355,340	+				+0.8
3,355,340	+				-0.7
3,355,341	-				+0.4
3,355,371	-				-1.5
3,355,377	-				-2.1
3,355,395	+				+0.1
3,355,396	-				-1.0
3,355,397	+				-0.8
3,355,398	-				+0.0
3,355,398	-				+0.1
3,355,497	-		RR42_RS35225	0.15	+0.5
3,355,576	-		RR42_RS35225	0.19	+0.7
3,355,576	-		RR42_RS35225	0.19	-2.0
3,355,688	+		RR42_RS35225	0.26	-0.1
3,355,688	+		RR42_RS35225	0.26	-0.2
3,355,811	+		RR42_RS35225	0.33	-1.0
3,356,015	+		RR42_RS35225	0.45	-0.7
3,356,015	+		RR42_RS35225	0.45	-0.2
3,356,016	-		RR42_RS35225	0.45	-0.4
3,356,016	-		RR42_RS35225	0.45	-0.1
3,356,016	-		RR42_RS35225	0.45	+0.4