Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35205

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,350,246	+		RR42_RS35200	0.27	+1.9
3,350,246	+		RR42_RS35200	0.27	-0.5
3,350,247	-		RR42_RS35200	0.27	+0.7
3,350,285	+		RR42_RS35200	0.32	+0.1
3,350,286	-		RR42_RS35200	0.32	+1.9
3,350,613	+		RR42_RS35200	0.68	-0.4
3,350,663	-		RR42_RS35200	0.74	+0.3
3,350,826	+				-1.9
3,350,826	+				+0.8
3,350,827	-				+1.2
3,350,827	-				-0.8
3,350,827	-				+0.1
3,351,053	+				-0.1
3,351,053	+				+0.7
3,351,053	+				+0.5
3,351,053	+				+0.7
3,351,053	+				-0.1
3,351,054	-				+0.6
3,351,054	-				-1.0
3,351,054	-				-1.4
3,351,112	+				+0.1
3,351,113	-				+1.0
3,351,160	-				+0.6
3,351,220	+				+0.6
3,351,276	+		RR42_RS35205	0.13	-0.6
3,351,276	+		RR42_RS35205	0.13	-0.3
3,351,276	+		RR42_RS35205	0.13	+0.0
3,351,283	+		RR42_RS35205	0.15	-0.3
3,351,283	+		RR42_RS35205	0.15	-0.9
3,351,284	-		RR42_RS35205	0.15	-1.5
3,351,285	+		RR42_RS35205	0.16	-2.1
3,351,285	+		RR42_RS35205	0.16	+1.0
3,351,285	+		RR42_RS35205	0.16	-2.0
3,351,444	+		RR42_RS35205	0.67	+1.0
3,351,445	-		RR42_RS35205	0.67	+0.5
3,351,445	-		RR42_RS35205	0.67	+1.3
3,351,751	-				-0.0
3,351,819	+				+0.4
3,351,819	+				-0.2
3,351,820	-				+0.8
3,351,820	-				+0.1
3,351,820	-				-0.6
3,351,820	-				+0.4
3,351,820	-				-0.6
3,351,851	+				-0.4
3,351,852	-				-1.2
3,352,024	+		RR42_RS35210	0.13	-1.7
3,352,025	-		RR42_RS35210	0.13	+0.3
3,352,025	-		RR42_RS35210	0.13	-0.5
3,352,025	-		RR42_RS35210	0.13	-1.5
3,352,025	-		RR42_RS35210	0.13	-0.1
3,352,267	-		RR42_RS35210	0.33	-0.0
3,352,402	+		RR42_RS35210	0.44	+0.2