Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34480

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,165,808	+		RR42_RS34475	0.57	+0.3
3,165,823	+		RR42_RS34475	0.58	+0.5
3,165,825	+		RR42_RS34475	0.58	-1.8
3,165,826	-		RR42_RS34475	0.58	-0.2
3,165,826	-		RR42_RS34475	0.58	-0.5
3,165,826	-		RR42_RS34475	0.58	-0.1
3,166,089	+		RR42_RS34475	0.77	+0.8
3,166,183	+		RR42_RS34475	0.84	+0.3
3,166,227	+		RR42_RS34475	0.87	-0.1
3,166,227	+		RR42_RS34475	0.87	-0.2
3,166,228	-		RR42_RS34475	0.87	+0.2
3,166,228	-		RR42_RS34475	0.87	+1.0
3,166,291	-				+1.2
3,166,470	-				+1.0
3,166,599	+				-0.8
3,166,600	-				-1.1
3,166,600	-				+0.1
3,166,600	-				-1.5
3,166,627	-				-0.8
3,166,630	+				-1.0
3,166,630	+				+0.6
3,166,631	-				-0.8
3,166,744	+				+0.2
3,166,923	+		RR42_RS34480	0.22	-1.1
3,166,924	-		RR42_RS34480	0.22	-2.4
3,166,924	-		RR42_RS34480	0.22	-0.2
3,166,924	-		RR42_RS34480	0.22	-0.3
3,166,924	-		RR42_RS34480	0.22	-0.7
3,166,944	-		RR42_RS34480	0.23	+2.6
3,167,115	+		RR42_RS34480	0.35	-0.8
3,167,115	+		RR42_RS34480	0.35	-0.6
3,167,115	+		RR42_RS34480	0.35	-0.4
3,167,116	-		RR42_RS34480	0.35	-0.3
3,167,293	-		RR42_RS34480	0.47	-0.7
3,167,472	+		RR42_RS34480	0.59	-0.6
3,167,473	-		RR42_RS34480	0.59	+0.2
3,167,490	+		RR42_RS34480	0.60	-1.9
3,167,577	+		RR42_RS34480	0.66	+0.0
3,167,684	-		RR42_RS34480	0.73	-2.2
3,167,779	+		RR42_RS34480	0.80	-2.9
3,167,779	+		RR42_RS34480	0.80	-0.4
3,167,780	-		RR42_RS34480	0.80	-0.4
3,167,780	-		RR42_RS34480	0.80	+0.7
3,167,848	+		RR42_RS34480	0.85	+1.0
3,167,848	+		RR42_RS34480	0.85	-0.2
3,167,848	+		RR42_RS34480	0.85	+0.2
3,168,116	+				-1.4
3,168,193	+				+0.6
3,168,225	+				-0.4
3,168,225	+				-1.1
3,168,226	-				+0.2
3,168,226	-				-0.9
3,168,721	+		RR42_RS34485	0.48	-2.2
3,168,721	+		RR42_RS34485	0.48	-0.3
3,168,722	-		RR42_RS34485	0.48	-1.6
3,168,987	+		RR42_RS34485	0.75	-1.3