Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34270

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,115,642	+		RR42_RS34260	0.82	-0.5
3,115,643	-		RR42_RS34260	0.83	+0.8
3,116,148	+		RR42_RS34265	0.55	+0.3
3,116,172	-		RR42_RS34265	0.61	-0.1
3,116,203	+		RR42_RS34265	0.69	+1.1
3,116,203	+		RR42_RS34265	0.69	+0.8
3,116,204	-		RR42_RS34265	0.69	+1.1
3,116,378	+				+0.5
3,116,378	+				-0.8
3,116,379	-				-0.1
3,116,379	-				-0.0
3,116,379	-				+0.9
3,116,399	+				+0.1
3,116,399	+				-0.5
3,116,407	-				+0.2
3,116,870	+		RR42_RS34270	0.26	-0.9
3,116,873	+		RR42_RS34270	0.26	+0.4
3,116,874	-		RR42_RS34270	0.26	-1.0
3,116,874	-		RR42_RS34270	0.26	-0.2
3,116,874	-		RR42_RS34270	0.26	+0.2
3,117,285	+		RR42_RS34270	0.47	-0.9
3,117,286	-		RR42_RS34270	0.47	-0.1
3,117,286	-		RR42_RS34270	0.47	-0.6
3,117,369	+		RR42_RS34270	0.52	+0.2
3,117,370	-		RR42_RS34270	0.52	-1.0
3,117,370	-		RR42_RS34270	0.52	-1.1
3,118,121	+				-0.4
3,118,121	+				+0.5
3,118,121	+				+0.2
3,118,121	+				+0.2
3,118,121	+				-1.0
3,118,122	-				-1.0
3,118,122	-				-0.7
3,118,122	-				+0.6
3,118,122	-				-1.9
3,118,179	-				+1.4
3,118,399	+				+0.6
3,118,400	-				-1.2
3,118,449	-				+0.8
3,118,449	-				-0.3
3,118,532	+				-1.0
3,118,548	+				+0.3
3,118,548	+				+0.2
3,118,549	-				-0.0
3,118,549	-				+1.0
3,118,759	-		RR42_RS34275	0.59	+1.7
3,118,870	+		RR42_RS34275	0.86	+0.4
3,118,870	+		RR42_RS34275	0.86	-0.1
3,118,870	+		RR42_RS34275	0.86	+0.5
3,118,871	-		RR42_RS34275	0.86	+0.9
3,119,174	+		RR42_RS34280	0.81	-0.3
3,119,174	+		RR42_RS34280	0.81	-1.5
3,119,175	-		RR42_RS34280	0.82	-0.1
3,119,175	-		RR42_RS34280	0.82	-0.5
3,119,175	-		RR42_RS34280	0.82	+0.2
3,119,273	+				-2.0
3,119,273	+				-1.3
3,119,274	-				+0.8
3,119,274	-				+1.0
3,119,278	+				+0.1
3,119,279	-				-0.1
3,119,279	-				+0.7