Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34240

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,106,911	-				-1.1
3,106,911	-				-1.9
3,106,911	-				-0.3
3,106,926	-				+0.6
3,107,000	+				+1.2
3,107,000	+				+0.6
3,107,000	+				-0.4
3,107,000	+				+0.2
3,107,001	-				+1.0
3,107,025	-		RR42_RS34235	0.11	+0.2
3,107,352	-		RR42_RS34235	0.43	+1.6
3,107,352	-		RR42_RS34235	0.43	+0.0
3,107,370	-		RR42_RS34235	0.45	+0.4
3,107,395	+		RR42_RS34235	0.48	+0.9
3,107,395	+		RR42_RS34235	0.48	-0.6
3,107,641	+		RR42_RS34235	0.72	+0.4
3,107,642	-		RR42_RS34235	0.73	+0.7
3,107,731	+		RR42_RS34235	0.82	-3.8
3,107,731	+		RR42_RS34235	0.82	-0.8
3,107,731	+		RR42_RS34235	0.82	-1.1
3,107,732	-		RR42_RS34235	0.82	+0.8
3,107,732	-		RR42_RS34235	0.82	-0.7
3,107,801	+		RR42_RS34235	0.89	-0.8
3,107,801	+		RR42_RS34235	0.89	+1.6
3,107,802	-		RR42_RS34235	0.89	+0.2
3,107,802	-		RR42_RS34235	0.89	+2.8
3,107,955	-		RR42_RS34240	0.14	-0.9
3,107,965	+		RR42_RS34240	0.17	-0.7
3,107,966	-		RR42_RS34240	0.17	-1.8
3,108,085	+		RR42_RS34240	0.55	-0.7
3,108,086	-		RR42_RS34240	0.55	+0.2
3,108,106	+		RR42_RS34240	0.61	-0.4
3,108,106	+		RR42_RS34240	0.61	+0.2
3,108,107	-		RR42_RS34240	0.62	+1.2
3,108,108	+		RR42_RS34240	0.62	-1.1
3,108,109	-		RR42_RS34240	0.62	-1.0
3,108,157	-		RR42_RS34240	0.77	+0.5
3,108,267	-				-0.4
3,108,393	-				+1.4
3,108,511	+				+0.5
3,108,512	-				+0.6
3,108,772	+		RR42_RS34245	0.13	+0.4
3,108,773	-		RR42_RS34245	0.13	+1.4
3,108,790	+		RR42_RS34245	0.13	+0.6
3,108,791	-		RR42_RS34245	0.13	-0.8
3,108,791	-		RR42_RS34245	0.13	+2.0
3,108,802	+		RR42_RS34245	0.14	-1.4
3,108,803	-		RR42_RS34245	0.14	-1.5
3,108,922	+		RR42_RS34245	0.17	+1.1
3,109,064	-		RR42_RS34245	0.21	-1.1
3,109,064	-		RR42_RS34245	0.21	+0.7