Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34200

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,097,584	+		RR42_RS34195	0.40	+1.6
3,097,603	+		RR42_RS34195	0.43	-0.2
3,097,603	+		RR42_RS34195	0.43	+0.9
3,097,655	-		RR42_RS34195	0.51	-1.5
3,097,803	+		RR42_RS34195	0.75	-0.4
3,097,803	+		RR42_RS34195	0.75	+0.4
3,097,804	-		RR42_RS34195	0.76	+1.2
3,097,804	-		RR42_RS34195	0.76	+0.1
3,097,804	-		RR42_RS34195	0.76	-0.0
3,097,858	+		RR42_RS34195	0.84	-0.2
3,097,858	+		RR42_RS34195	0.84	+0.4
3,097,859	-		RR42_RS34195	0.85	+0.2
3,097,950	+				-1.1
3,097,950	+				-2.4
3,097,951	-				+1.2
3,098,109	+				-1.7
3,098,110	-				+0.2
3,098,174	+				+0.4
3,098,175	-				-1.2
3,098,187	+				+0.8
3,098,187	+				-3.3
3,098,188	-				-0.6
3,098,188	-				+1.1
3,098,188	-				+1.1
3,098,314	+				+0.8
3,098,315	-				-0.1
3,098,657	+		RR42_RS34200	0.29	+0.1
3,098,657	+		RR42_RS34200	0.29	+0.7
3,098,657	+		RR42_RS34200	0.29	-0.6
3,098,658	-		RR42_RS34200	0.29	-2.1
3,098,804	+		RR42_RS34200	0.48	-1.1
3,098,804	+		RR42_RS34200	0.48	-1.7
3,098,804	+		RR42_RS34200	0.48	+0.1
3,098,804	+		RR42_RS34200	0.48	-0.9
3,098,805	-		RR42_RS34200	0.48	+0.0
3,098,884	+		RR42_RS34200	0.59	+0.8
3,098,885	-		RR42_RS34200	0.59	+1.1
3,098,885	-		RR42_RS34200	0.59	-1.5
3,098,921	+		RR42_RS34200	0.63	-0.6
3,098,921	+		RR42_RS34200	0.63	-0.0
3,098,922	-		RR42_RS34200	0.63	+0.5
3,099,074	+		RR42_RS34200	0.83	-0.4
3,099,074	+		RR42_RS34200	0.83	-0.4
3,099,120	-		RR42_RS34200	0.89	+0.8
3,099,327	-				-0.1
3,099,434	-				-0.5
3,099,434	-				-1.4
3,099,476	-				-2.1
3,099,535	+				-1.6
3,099,588	-		RR42_RS34205	0.17	-0.1
3,099,792	-		RR42_RS34205	0.75	-0.6
3,099,806	+		RR42_RS34205	0.79	-0.5
3,099,807	-		RR42_RS34205	0.79	-1.8
3,099,807	-		RR42_RS34205	0.79	-1.0
3,099,939	+				-1.1