Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34040

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,066,533	-		RR42_RS34035	0.19	+2.3
3,066,551	+		RR42_RS34035	0.20	-2.0
3,066,552	-		RR42_RS34035	0.20	-1.0
3,066,552	-		RR42_RS34035	0.20	-0.1
3,066,552	-		RR42_RS34035	0.20	-0.8
3,066,553	+		RR42_RS34035	0.20	+0.4
3,066,553	+		RR42_RS34035	0.20	+0.4
3,066,553	+		RR42_RS34035	0.20	-2.6
3,066,554	-		RR42_RS34035	0.21	+0.1
3,066,554	-		RR42_RS34035	0.21	+0.6
3,066,554	-		RR42_RS34035	0.21	+0.4
3,066,554	-		RR42_RS34035	0.21	+0.9
3,066,749	+		RR42_RS34035	0.39	-0.8
3,066,749	+		RR42_RS34035	0.39	-0.2
3,066,749	+		RR42_RS34035	0.39	-0.9
3,066,750	-		RR42_RS34035	0.39	+0.1
3,066,825	+		RR42_RS34035	0.46	-0.0
3,066,872	-		RR42_RS34035	0.50	-0.4
3,066,923	-		RR42_RS34035	0.55	+1.1
3,067,075	+		RR42_RS34035	0.69	+1.4
3,067,075	+		RR42_RS34035	0.69	+0.7
3,067,076	-		RR42_RS34035	0.69	+1.8
3,067,076	-		RR42_RS34035	0.69	+0.1
3,067,076	-		RR42_RS34035	0.69	+0.3
3,067,076	-		RR42_RS34035	0.69	+0.1
3,067,076	-		RR42_RS34035	0.69	+0.5
3,067,111	+		RR42_RS34035	0.72	-0.0
3,067,201	+		RR42_RS34035	0.80	+1.1
3,067,201	+		RR42_RS34035	0.80	+0.6
3,067,319	+				-1.7
3,067,319	+				+1.1
3,067,363	+				-1.1
3,067,364	-				-1.6
3,067,364	-				-1.9
3,067,364	-				+1.1
3,067,364	-				-2.2
3,067,385	-				+0.7
3,067,385	-				-2.4
3,067,462	+				+3.1
3,067,463	-				-0.3
3,067,524	+				-0.4
3,067,525	-				-0.3
3,067,525	-				-1.0
3,067,525	-				+1.8
3,067,592	+		RR42_RS34040	0.16	-1.6
3,067,711	+		RR42_RS34040	0.31	-1.2
3,067,923	+		RR42_RS34040	0.58	+0.7
3,067,923	+		RR42_RS34040	0.58	-0.4
3,067,995	+		RR42_RS34040	0.67	-0.8
3,067,995	+		RR42_RS34040	0.67	-0.8
3,067,995	+		RR42_RS34040	0.67	+0.6
3,067,996	-		RR42_RS34040	0.67	-2.9
3,067,996	-		RR42_RS34040	0.67	+0.3
3,067,996	-		RR42_RS34040	0.67	+2.2
3,067,999	+		RR42_RS34040	0.67	+1.1
3,068,000	-		RR42_RS34040	0.68	+0.2
3,068,063	+		RR42_RS34040	0.76	+0.6
3,068,064	-		RR42_RS34040	0.76	+0.1
3,068,064	-		RR42_RS34040	0.76	-1.3
3,068,064	-		RR42_RS34040	0.76	+1.0
3,068,064	-		RR42_RS34040	0.76	+1.7
3,068,069	+		RR42_RS34040	0.76	-0.8
3,068,070	-		RR42_RS34040	0.76	-0.6
3,068,351	+				+1.8
3,068,364	-				+0.5
3,068,415	-				-0.2
3,068,441	-		RR42_RS34045	0.12	-1.3
3,068,441	-		RR42_RS34045	0.12	-1.4
3,068,529	+		RR42_RS34045	0.23	+1.3
3,068,529	+		RR42_RS34045	0.23	+0.1
3,068,530	-		RR42_RS34045	0.23	+0.4
3,068,530	-		RR42_RS34045	0.23	-0.5
3,068,530	-		RR42_RS34045	0.23	+0.4
3,068,815	-		RR42_RS34045	0.57	-1.7
3,068,815	-		RR42_RS34045	0.57	-0.2
3,068,950	-		RR42_RS34045	0.72	-0.4
3,068,985	+		RR42_RS34045	0.77	-1.9
3,068,986	-		RR42_RS34045	0.77	-0.4
3,069,063	+		RR42_RS34045	0.86	-0.4
3,069,063	+		RR42_RS34045	0.86	+0.2
3,069,063	+		RR42_RS34045	0.86	-0.2
3,069,063	+		RR42_RS34045	0.86	-0.9
3,069,063	+		RR42_RS34045	0.86	-1.5
3,069,064	-		RR42_RS34045	0.86	+0.0
3,069,064	-		RR42_RS34045	0.86	-0.8
3,069,064	-		RR42_RS34045	0.86	-1.9
3,069,064	-		RR42_RS34045	0.86	-3.2
3,069,064	-		RR42_RS34045	0.86	-1.2