Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33945

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,040,749	+				-2.5
3,040,750	-				-0.9
3,040,750	-				+0.4
3,040,755	+				+0.6
3,040,755	+				-0.2
3,040,756	-				-1.3
3,040,756	-				+0.1
3,040,803	+				-0.7
3,040,804	-				+0.7
3,040,804	-				-1.1
3,040,824	+				+0.4
3,040,824	+				-0.4
3,040,824	+				+1.4
3,040,825	-				+1.7
3,040,833	+		RR42_RS33935	0.10	+0.3
3,040,985	+		RR42_RS33935	0.42	-1.0
3,040,985	+		RR42_RS33935	0.42	+1.4
3,040,985	+		RR42_RS33935	0.42	+3.4
3,040,986	-		RR42_RS33935	0.42	-0.4
3,040,990	-		RR42_RS33935	0.43	+0.1
3,040,990	-		RR42_RS33935	0.43	+0.1
3,041,022	+		RR42_RS33935	0.50	+0.7
3,041,025	+		RR42_RS33935	0.51	+0.7
3,041,025	+		RR42_RS33935	0.51	-1.5
3,041,026	-		RR42_RS33935	0.51	+2.1
3,041,048	-		RR42_RS33935	0.55	-0.4
3,041,097	+		RR42_RS33935	0.66	+2.1
3,041,097	+		RR42_RS33935	0.66	+0.6
3,041,097	+		RR42_RS33935	0.66	+0.2
3,041,098	-		RR42_RS33935	0.66	-1.0
3,041,098	-		RR42_RS33935	0.66	+0.4
3,041,139	+		RR42_RS33935	0.75	-0.0
3,041,139	+		RR42_RS33935	0.75	+1.7
3,041,140	-		RR42_RS33935	0.75	-1.8
3,041,154	+		RR42_RS33935	0.78	+0.8
3,041,154	+		RR42_RS33935	0.78	-1.2
3,041,248	-				-3.5
3,041,267	+				-0.2
3,041,382	-		RR42_RS33940	0.30	+1.3
3,041,402	+		RR42_RS33940	0.37	-3.1
3,041,403	-		RR42_RS33940	0.37	-0.5
3,041,403	-		RR42_RS33940	0.37	-0.5
3,041,556	-		RR42_RS33940	0.86	+0.6
3,041,938	-		RR42_RS33945	0.19	-0.3
3,042,114	+		RR42_RS33945	0.32	-1.2
3,042,114	+		RR42_RS33945	0.32	+0.7
3,042,120	-		RR42_RS33945	0.32	-0.6
3,042,198	+		RR42_RS33945	0.38	+1.1
3,042,199	-		RR42_RS33945	0.38	-1.7
3,042,438	-		RR42_RS33945	0.56	+0.1
3,042,648	+		RR42_RS33945	0.72	-1.9
3,042,648	+		RR42_RS33945	0.72	-0.1
3,042,648	+		RR42_RS33945	0.72	+0.1
3,042,648	+		RR42_RS33945	0.72	-0.2
3,042,649	-		RR42_RS33945	0.72	-2.6
3,042,649	-		RR42_RS33945	0.72	+0.5
3,042,649	-		RR42_RS33945	0.72	+0.6
3,042,649	-		RR42_RS33945	0.72	-0.6
3,042,780	+		RR42_RS33945	0.82	-0.8
3,042,780	+		RR42_RS33945	0.82	-0.5
3,042,781	-		RR42_RS33945	0.82	-1.2
3,042,813	+		RR42_RS33945	0.84	-0.4
3,042,885	+		RR42_RS33945	0.89	-0.5
3,042,885	+		RR42_RS33945	0.89	+0.6
3,042,885	+		RR42_RS33945	0.89	-1.4
3,042,885	+		RR42_RS33945	0.89	+0.1
3,042,886	-		RR42_RS33945	0.89	-0.1
3,042,886	-		RR42_RS33945	0.89	-1.2
3,042,898	-				+0.2
3,042,943	+				-1.9
3,042,943	+				+1.1
3,042,943	+				+0.5
3,042,944	-				-0.9
3,042,944	-				-1.6
3,043,214	-				+1.1
3,043,214	-				+0.2
3,043,395	+		RR42_RS33950	0.16	-0.7
3,043,396	-		RR42_RS33950	0.16	-0.2
3,043,396	-		RR42_RS33950	0.16	-0.1
3,043,396	-		RR42_RS33950	0.16	+0.8
3,043,600	+		RR42_RS33950	0.28	+0.8
3,043,601	-		RR42_RS33950	0.28	-1.2
3,043,894	+		RR42_RS33950	0.45	-3.1
3,043,895	-		RR42_RS33950	0.45	+1.1
3,043,895	-		RR42_RS33950	0.45	-1.0