Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33760

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,001,362	+		RR42_RS33755	0.44	+0.5
3,001,363	-		RR42_RS33755	0.44	+0.9
3,001,564	-		RR42_RS33755	0.62	+0.7
3,001,658	+		RR42_RS33755	0.71	-0.3
3,001,658	+		RR42_RS33755	0.71	-3.4
3,001,659	-		RR42_RS33755	0.71	+1.6
3,001,803	+		RR42_RS33755	0.84	-0.7
3,001,803	+		RR42_RS33755	0.84	-0.1
3,001,804	-		RR42_RS33755	0.85	+0.2
3,001,804	-		RR42_RS33755	0.85	-1.9
3,001,806	+		RR42_RS33755	0.85	-0.1
3,001,807	-		RR42_RS33755	0.85	-2.2
3,001,807	-		RR42_RS33755	0.85	-1.2
3,001,821	+		RR42_RS33755	0.86	+0.2
3,001,821	+		RR42_RS33755	0.86	-0.7
3,001,821	+		RR42_RS33755	0.86	-1.5
3,001,822	-		RR42_RS33755	0.86	-2.6
3,001,824	+		RR42_RS33755	0.86	+0.6
3,001,825	-		RR42_RS33755	0.87	-0.0
3,001,959	+				-2.5
3,001,960	-				-0.1
3,001,960	-				+0.3
3,001,960	-				+0.5
3,002,025	+				+0.1
3,002,098	+				-0.4
3,002,309	+		RR42_RS33760	0.22	-1.1
3,002,310	-				-0.2
3,002,432	+		RR42_RS33760	0.36	-0.3
3,002,433	-		RR42_RS33760	0.36	-2.1
3,002,539	-		RR42_RS33760	0.48	-0.3
3,002,628	-		RR42_RS33760	0.58	-1.4
3,002,760	+		RR42_RS33760	0.73	-0.0
3,002,761	-		RR42_RS33760	0.73	+1.1
3,002,897	+		RR42_RS33760	0.88	-0.5
3,002,897	+		RR42_RS33760	0.88	-0.5
3,002,898	-		RR42_RS33760	0.88	-2.1
3,002,898	-		RR42_RS33760	0.88	-0.7
3,002,919	+				-2.2
3,003,025	+				+0.1
3,003,026	-				-2.1
3,003,026	-				-0.5
3,003,038	+				-3.2
3,003,039	-				-0.1
3,003,044	+				-2.5
3,003,045	-				+1.2
3,003,133	+				-0.4
3,003,133	+				+0.0
3,003,134	-				+0.0
3,003,134	-				-0.5
3,003,134	-				-2.3
3,003,134	-				-1.8
3,003,141	+				-2.1
3,003,141	+				-0.9
3,003,142	-				+0.1
3,003,301	+				-0.7
3,003,302	-				-0.7
3,003,397	+		RR42_RS33765	0.11	+0.6
3,003,397	+		RR42_RS33765	0.11	-0.9
3,003,708	-		RR42_RS33765	0.29	+0.2