Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33285

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,881,544	+		RR42_RS33280	0.20	-0.7
2,881,613	+		RR42_RS33280	0.26	-0.8
2,881,614	-		RR42_RS33280	0.26	+2.2
2,881,614	-		RR42_RS33280	0.26	-0.5
2,881,634	+		RR42_RS33280	0.28	+0.6
2,881,634	+		RR42_RS33280	0.28	-0.1
2,881,634	+		RR42_RS33280	0.28	-0.6
2,881,634	+		RR42_RS33280	0.28	+1.1
2,881,634	+		RR42_RS33280	0.28	-1.0
2,881,635	-		RR42_RS33280	0.28	-0.5
2,881,635	-		RR42_RS33280	0.28	-1.2
2,881,635	-		RR42_RS33280	0.28	+0.1
2,881,635	-		RR42_RS33280	0.28	+0.6
2,881,635	-		RR42_RS33280	0.28	+0.2
2,881,635	-		RR42_RS33280	0.28	-0.5
2,881,635	-		RR42_RS33280	0.28	-1.1
2,881,679	+		RR42_RS33280	0.32	+2.2
2,881,679	+		RR42_RS33280	0.32	+0.4
2,881,679	+		RR42_RS33280	0.32	-0.7
2,881,680	-		RR42_RS33280	0.32	+0.4
2,881,680	-		RR42_RS33280	0.32	-2.5
2,881,733	+		RR42_RS33280	0.37	+0.6
2,881,733	+		RR42_RS33280	0.37	+0.2
2,881,733	+		RR42_RS33280	0.37	-0.4
2,881,733	+		RR42_RS33280	0.37	-0.9
2,881,734	-		RR42_RS33280	0.37	-0.2
2,881,734	-		RR42_RS33280	0.37	-2.4
2,881,734	-		RR42_RS33280	0.37	-1.7
2,881,734	-		RR42_RS33280	0.37	+0.8
2,881,734	-		RR42_RS33280	0.37	-2.8
2,881,734	-		RR42_RS33280	0.37	+1.1
2,881,856	+		RR42_RS33280	0.48	+1.6
2,881,856	+		RR42_RS33280	0.48	-0.9
2,881,857	-		RR42_RS33280	0.48	+0.7
2,881,995	-		RR42_RS33280	0.60	+0.5
2,881,995	-		RR42_RS33280	0.60	-0.6
2,882,172	-		RR42_RS33280	0.76	+0.6
2,882,456	+				-0.9
2,882,457	-				+1.1
2,882,626	+		RR42_RS33285	0.34	+1.2
2,882,627	-		RR42_RS33285	0.34	+0.8
2,882,632	+		RR42_RS33285	0.35	-0.5
2,882,633	-		RR42_RS33285	0.35	+0.9
2,882,707	-		RR42_RS33285	0.52	+0.3
2,882,854	+		RR42_RS33285	0.83	-0.1
2,883,088	-				-0.9
2,883,131	+				+0.2
2,883,132	-				-0.5
2,883,162	+				+2.3
2,883,162	+				+0.7
2,883,162	+				+0.7
2,883,163	-				+2.2
2,883,194	+				+0.3
2,883,270	+				+1.0
2,883,270	+				+2.1
2,883,271	-				-0.0
2,883,344	+				+0.1
2,883,348	-				-0.7
2,883,348	-				+1.4
2,883,642	-		RR42_RS33290	0.19	+1.3
2,883,642	-		RR42_RS33290	0.19	+0.9
2,883,642	-		RR42_RS33290	0.19	-0.5
2,883,849	-		RR42_RS33290	0.30	+0.2
2,883,881	+		RR42_RS33290	0.32	+0.4