Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33080

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,826,486	-		RR42_RS33075	0.19	+0.1
2,826,647	+		RR42_RS33075	0.36	+1.9
2,826,648	-		RR42_RS33075	0.36	+0.1
2,826,717	-		RR42_RS33075	0.44	-0.2
2,826,717	-		RR42_RS33075	0.44	-1.3
2,826,758	+		RR42_RS33075	0.48	+0.5
2,826,758	+		RR42_RS33075	0.48	-2.5
2,826,759	-		RR42_RS33075	0.48	-2.9
2,826,797	+		RR42_RS33075	0.52	+2.0
2,826,821	+		RR42_RS33075	0.55	-0.2
2,826,821	+		RR42_RS33075	0.55	+0.9
2,826,821	+		RR42_RS33075	0.55	-1.5
2,826,821	+		RR42_RS33075	0.55	+0.6
2,826,821	+		RR42_RS33075	0.55	+0.3
2,826,822	-		RR42_RS33075	0.55	+0.0
2,826,825	+		RR42_RS33075	0.55	+0.2
2,826,825	+		RR42_RS33075	0.55	-1.8
2,826,825	+		RR42_RS33075	0.55	+0.4
2,826,825	+		RR42_RS33075	0.55	+0.1
2,826,825	+		RR42_RS33075	0.55	-1.9
2,826,825	+		RR42_RS33075	0.55	-2.7
2,826,825	+		RR42_RS33075	0.55	+0.2
2,826,825	+		RR42_RS33075	0.55	-1.0
2,826,825	+		RR42_RS33075	0.55	-0.1
2,826,826	-		RR42_RS33075	0.55	+1.5
2,826,826	-		RR42_RS33075	0.55	+2.2
2,826,826	-		RR42_RS33075	0.55	-2.2
2,826,826	-		RR42_RS33075	0.55	+0.1
2,826,826	-		RR42_RS33075	0.55	+0.3
2,826,872	+		RR42_RS33075	0.60	+0.5
2,826,872	+		RR42_RS33075	0.60	-0.3
2,826,872	+		RR42_RS33075	0.60	-1.1
2,827,101	+		RR42_RS33075	0.84	-2.4
2,827,187	+				-0.2
2,827,187	+				+0.2
2,827,188	-				+1.8
2,827,188	-				-2.4
2,827,188	-				+0.5
2,827,239	+				-2.3
2,827,240	-				-0.7
2,827,404	+		RR42_RS33080	0.16	-0.1
2,827,404	+		RR42_RS33080	0.16	+0.0
2,827,405	-		RR42_RS33080	0.16	-0.7
2,827,405	-		RR42_RS33080	0.16	+0.9
2,827,481	+		RR42_RS33080	0.25	-1.4
2,827,481	+		RR42_RS33080	0.25	+0.2
2,827,481	+		RR42_RS33080	0.25	+0.7
2,827,481	+		RR42_RS33080	0.25	+0.4
2,827,481	+		RR42_RS33080	0.25	+1.0
2,827,482	-		RR42_RS33080	0.25	+1.6
2,827,517	+		RR42_RS33080	0.29	-1.5
2,827,517	+		RR42_RS33080	0.29	-0.7
2,827,518	-		RR42_RS33080	0.29	+0.2
2,827,518	-		RR42_RS33080	0.29	-0.1
2,827,518	-		RR42_RS33080	0.29	-0.3
2,827,656	-		RR42_RS33080	0.46	-0.4
2,827,926	-		RR42_RS33080	0.78	+1.3
2,828,134	-				-1.1
2,828,321	-				+1.4
2,828,461	+				-1.2
2,828,462	-				+0.5
2,828,462	-				-2.3
2,828,519	-				+1.5
2,828,519	-				-2.1
2,828,524	+				-0.5
2,828,524	+				+0.5
2,828,524	+				+0.0
2,828,525	-				+0.0
2,828,530	+				+0.8
2,828,530	+				+0.6
2,828,530	+				+1.0
2,828,531	-				-0.4
2,828,609	+				-0.5
2,828,610	-				+0.5
2,828,610	-				-0.3
2,828,610	-				+0.7
2,828,610	-				+2.0
2,828,611	+				+0.3
2,828,753	-				+0.5
2,828,887	+				-0.4
2,828,888	-				-0.8
2,828,888	-				+0.9
2,828,913	+				+1.0