Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32970

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,795,501	-		RR42_RS32965	0.65	+1.0
2,795,501	-		RR42_RS32965	0.65	-1.3
2,796,303	+		RR42_RS32970	0.15	+0.2
2,796,350	+		RR42_RS32970	0.18	+0.7
2,796,351	-		RR42_RS32970	0.18	-1.5
2,796,351	-		RR42_RS32970	0.18	+0.2
2,796,351	-		RR42_RS32970	0.18	-1.2
2,796,351	-		RR42_RS32970	0.18	-1.3
2,796,461	+		RR42_RS32970	0.25	+0.5
2,796,462	-		RR42_RS32970	0.25	-0.6
2,796,462	-		RR42_RS32970	0.25	+0.5
2,796,462	-		RR42_RS32970	0.25	-2.1
2,796,579	-		RR42_RS32970	0.32	+0.6
2,796,579	-		RR42_RS32970	0.32	-1.3
2,796,579	-		RR42_RS32970	0.32	+0.5
2,796,759	-		RR42_RS32970	0.43	+0.3
2,796,759	-		RR42_RS32970	0.43	-2.9
2,796,807	-		RR42_RS32970	0.46	+0.3
2,796,807	-		RR42_RS32970	0.46	-1.0
2,796,810	+		RR42_RS32970	0.46	-0.9
2,796,810	+		RR42_RS32970	0.46	+0.2
2,796,811	-		RR42_RS32970	0.46	+0.4
2,796,951	-		RR42_RS32970	0.55	-0.0
2,796,951	-		RR42_RS32970	0.55	+2.6
2,797,202	+		RR42_RS32970	0.71	-1.0
2,797,202	+		RR42_RS32970	0.71	-1.0
2,797,203	-		RR42_RS32970	0.71	-1.8
2,797,203	-		RR42_RS32970	0.71	-0.5
2,797,203	-		RR42_RS32970	0.71	+0.0
2,797,203	-		RR42_RS32970	0.71	-0.7
2,797,206	-		RR42_RS32970	0.71	-2.1
2,797,296	+		RR42_RS32970	0.76	-0.1
2,797,296	+		RR42_RS32970	0.76	-0.8
2,797,389	+		RR42_RS32970	0.82	+0.8
2,797,390	-		RR42_RS32970	0.82	+0.8
2,797,390	-		RR42_RS32970	0.82	-1.3
2,797,390	-		RR42_RS32970	0.82	-1.3
2,797,512	-		RR42_RS32970	0.90	+1.0
2,797,512	-		RR42_RS32970	0.90	-1.7
2,797,766	+				+0.2
2,797,766	+				-3.3
2,797,766	+				+0.0
2,797,767	-				+0.6
2,797,767	-				-0.1
2,797,784	-				-0.1
2,797,816	+				+0.0
2,798,334	+		RR42_RS32975	0.56	-0.5
2,798,335	-		RR42_RS32975	0.56	-1.0
2,798,640	-				-0.6
2,798,640	-				-0.3