Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31715

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,492,483	+		RR42_RS31710	0.53	+0.2
2,492,483	+		RR42_RS31710	0.53	-0.7
2,492,483	+		RR42_RS31710	0.53	+0.1
2,492,483	+		RR42_RS31710	0.53	+0.1
2,492,483	+		RR42_RS31710	0.53	+0.4
2,492,484	-		RR42_RS31710	0.53	-0.1
2,492,484	-		RR42_RS31710	0.53	-1.1
2,492,514	+		RR42_RS31710	0.59	-2.1
2,492,514	+		RR42_RS31710	0.59	-1.2
2,492,514	+		RR42_RS31710	0.59	+0.2
2,492,515	-		RR42_RS31710	0.59	-0.5
2,492,528	+		RR42_RS31710	0.62	-1.3
2,492,528	+		RR42_RS31710	0.62	+0.9
2,492,528	+		RR42_RS31710	0.62	-2.9
2,492,528	+		RR42_RS31710	0.62	-1.7
2,492,529	-		RR42_RS31710	0.62	-0.9
2,492,529	-		RR42_RS31710	0.62	+2.1
2,492,529	-		RR42_RS31710	0.62	+0.8
2,492,529	-		RR42_RS31710	0.62	-1.0
2,492,529	-		RR42_RS31710	0.62	-3.4
2,492,530	+		RR42_RS31710	0.62	-0.2
2,492,530	+		RR42_RS31710	0.62	+1.1
2,492,530	+		RR42_RS31710	0.62	-1.7
2,492,530	+		RR42_RS31710	0.62	-0.2
2,492,531	-		RR42_RS31710	0.62	+0.7
2,492,531	-		RR42_RS31710	0.62	-1.7
2,492,531	-		RR42_RS31710	0.62	-0.6
2,492,531	-		RR42_RS31710	0.62	+0.3
2,492,531	-		RR42_RS31710	0.62	-0.2
2,492,531	-		RR42_RS31710	0.62	-1.9
2,492,634	+		RR42_RS31710	0.82	+0.1
2,492,634	+		RR42_RS31710	0.82	-1.7
2,492,635	-		RR42_RS31710	0.83	-1.9
2,492,635	-		RR42_RS31710	0.83	-0.1
2,492,639	+		RR42_RS31710	0.83	+0.2
2,492,699	+				-0.1
2,492,716	+				-0.2
2,492,717	-				+1.3
2,492,717	-				+0.2
2,492,720	+				+0.3
2,492,721	-				-1.1
2,492,724	-				-0.4
2,492,728	-				+0.7
2,492,890	-				-0.1
2,492,901	+				-0.6
2,493,057	+				-0.3
2,493,110	+				-1.0
2,493,133	-				+1.3
2,493,153	-				-1.9
2,493,153	-				-0.9
2,493,173	+				+1.2
2,493,419	+				+0.5
2,493,420	-				+0.1
2,493,605	+		RR42_RS31715	0.57	-1.5
2,493,684	+		RR42_RS31715	0.81	+0.1
2,493,685	-		RR42_RS31715	0.81	+0.5
2,493,703	+		RR42_RS31715	0.86	-1.5
2,493,704	-		RR42_RS31715	0.87	-0.4
2,493,720	-				-0.7
2,493,720	-				-1.3
2,493,720	-				-2.4
2,493,724	+				-0.5
2,493,724	+				+1.0
2,493,724	+				+0.1
2,493,724	+				-0.4
2,493,724	+				-1.1
2,493,725	-				-0.4
2,493,725	-				-0.2
2,493,725	-				-2.3
2,493,725	-				-0.8
2,493,725	-				-2.0
2,493,725	-				-1.4
2,493,725	-				-1.4
2,493,725	-				-0.1
2,493,725	-				-0.3
2,493,754	-				-1.8
2,493,798	+				+0.2
2,493,799	-				+0.8
2,493,799	-				+0.1
2,493,799	-				-0.8
2,493,814	-				-0.2
2,493,814	-				+0.3
2,493,822	+				-0.8
2,493,822	+				+1.1
2,494,023	+				-0.6
2,494,023	+				+1.1
2,494,234	+				+2.0
2,494,369	-				+0.5
2,494,370	+				+0.5
2,494,425	+				-0.7