Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31475

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,440,794	-		RR42_RS31465	0.55	+0.8
2,440,888	+		RR42_RS31465	0.66	-0.8
2,440,889	-		RR42_RS31465	0.66	-0.6
2,440,889	-		RR42_RS31465	0.66	-0.3
2,441,094	+		RR42_RS31465	0.89	+0.1
2,441,111	+				+1.1
2,441,111	+				-1.5
2,441,111	+				+0.3
2,441,112	-				+1.1
2,441,331	+				+0.3
2,441,377	+		RR42_RS31470	0.32	+0.3
2,441,378	-		RR42_RS31470	0.32	+0.1
2,441,378	-		RR42_RS31470	0.32	-2.1
2,441,378	-		RR42_RS31470	0.32	+0.8
2,441,378	-		RR42_RS31470	0.32	+0.1
2,441,378	-		RR42_RS31470	0.32	+1.3
2,441,378	-		RR42_RS31470	0.32	-0.2
2,441,547	+				-1.1
2,441,585	+				+0.4
2,441,585	+				-0.4
2,441,585	+				+0.7
2,441,585	+				-0.0
2,441,585	+				-0.0
2,441,585	+				-0.3
2,441,586	-				-0.4
2,441,586	-				-0.8
2,441,586	-				+0.4
2,441,589	+				+0.5
2,441,589	+				-0.7
2,441,589	+				-1.5
2,441,589	+				+0.1
2,441,589	+				-1.1
2,441,590	-				-1.3
2,441,590	-				-1.7
2,441,590	-				+0.2
2,441,630	+				-0.1
2,441,631	-				-1.1
2,441,631	-				+2.1
2,441,690	+				-0.5
2,441,793	+		RR42_RS31475	0.11	+0.7
2,441,793	+		RR42_RS31475	0.11	-1.0
2,441,794	-		RR42_RS31475	0.11	-0.5
2,441,794	-		RR42_RS31475	0.11	+1.3
2,441,878	-		RR42_RS31475	0.24	+0.0
2,441,985	+		RR42_RS31475	0.41	+1.2
2,441,985	+		RR42_RS31475	0.41	+0.0
2,441,986	-		RR42_RS31475	0.41	-0.6
2,442,072	+		RR42_RS31475	0.54	+0.4
2,442,072	+				+0.0
2,442,072	+		RR42_RS31475	0.54	-0.4
2,442,072	+		RR42_RS31475	0.54	-1.7
2,442,073	-		RR42_RS31475	0.55	-1.0
2,442,073	-		RR42_RS31475	0.55	+0.6
2,442,073	-		RR42_RS31475	0.55	-1.1
2,442,073	-		RR42_RS31475	0.55	-1.5
2,442,073	-		RR42_RS31475	0.55	-0.5
2,442,169	-		RR42_RS31475	0.69	-0.2
2,442,169	-		RR42_RS31475	0.69	+0.0
2,442,183	+		RR42_RS31475	0.72	+1.0
2,442,183	+		RR42_RS31475	0.72	-1.2
2,442,183	+		RR42_RS31475	0.72	-0.5
2,442,184	-		RR42_RS31475	0.72	-0.9
2,442,184	-		RR42_RS31475	0.72	-1.2
2,442,223	+		RR42_RS31475	0.78	+0.4
2,442,404	+				-0.1
2,442,404	+				+0.9
2,442,404	+				-0.8
2,442,405	-				-0.8
2,442,405	-				-0.3
2,442,405	-				+0.7
2,442,590	+				-0.6
2,442,590	+				-0.9
2,442,591	-				+0.0
2,442,593	+				+0.4
2,442,593	+				-1.1
2,442,594	-				-0.2
2,442,594	-				-1.3
2,443,156	+		RR42_RS31480	0.18	-0.1
2,443,157	-		RR42_RS31480	0.18	-3.0