Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31460

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,438,662	-		RR42_RS31455	0.79	-0.7
2,438,710	+				-2.0
2,438,777	+				-0.1
2,438,777	+				+0.2
2,438,777	+				-0.9
2,438,777	+				+1.2
2,438,778	-				+0.9
2,438,778	-				+0.8
2,438,778	-				-2.0
2,438,778	-				+0.2
2,438,778	-				+0.8
2,438,778	-				-0.1
2,438,778	-				-1.7
2,438,778	-				+0.8
2,438,779	+				+0.9
2,438,823	+				-0.2
2,438,824	-				+0.6
2,438,889	-				+0.2
2,438,889	-				-1.0
2,439,143	+				-0.1
2,439,211	+				-0.6
2,439,211	+				+0.4
2,439,211	+				+0.5
2,439,212	-				+0.2
2,439,220	+				+0.0
2,439,220	+				-1.8
2,439,220	+				-0.0
2,439,221	-				+0.4
2,439,221	-				-1.2
2,439,240	-				-0.3
2,439,348	+				-1.5
2,439,349	-				-1.3
2,439,446	-				-2.3
2,439,457	-				+0.6
2,439,500	-				-0.6
2,439,509	+				+0.5
2,439,739	+		RR42_RS31460	0.24	+0.3
2,439,739	+		RR42_RS31460	0.24	+1.3
2,439,739	+		RR42_RS31460	0.24	-0.6
2,439,740	-		RR42_RS31460	0.24	+0.1
2,439,833	+		RR42_RS31460	0.38	+1.6
2,439,833	+		RR42_RS31460	0.38	+0.3
2,439,834	-		RR42_RS31460	0.39	-1.1
2,439,834	-		RR42_RS31460	0.39	+0.2
2,439,834	-		RR42_RS31460	0.39	+1.6
2,439,834	-		RR42_RS31460	0.39	-0.4
2,439,962	+		RR42_RS31460	0.59	+1.1
2,439,962	+		RR42_RS31460	0.59	-1.3
2,439,962	+		RR42_RS31460	0.59	+0.6
2,439,962	+		RR42_RS31460	0.59	-0.9
2,439,962	+		RR42_RS31460	0.59	+0.8
2,439,962	+		RR42_RS31460	0.59	+1.1
2,439,963	-		RR42_RS31460	0.59	-0.7
2,439,964	+		RR42_RS31460	0.59	+1.2
2,439,965	-		RR42_RS31460	0.59	+0.2
2,439,965	-		RR42_RS31460	0.59	+0.1
2,440,132	+		RR42_RS31460	0.85	-0.1
2,440,205	-				-0.8
2,440,224	+				-1.9
2,440,224	+				-1.8
2,440,225	-				-0.1
2,440,225	-				-0.9
2,440,230	+				-0.8
2,440,298	-				-2.2
2,440,298	-				+0.3
2,440,307	+				-0.5
2,440,380	+				-0.1
2,440,380	+				+0.1
2,440,381	-				+0.5
2,440,428	+		RR42_RS31465	0.14	-0.1
2,440,429	-		RR42_RS31465	0.15	+1.1
2,440,794	-		RR42_RS31465	0.55	+0.8
2,440,888	+		RR42_RS31465	0.66	-0.8
2,440,889	-		RR42_RS31465	0.66	-0.6
2,440,889	-		RR42_RS31465	0.66	-0.3
2,441,094	+		RR42_RS31465	0.89	+0.1
2,441,111	+				+1.1
2,441,111	+				-1.5
2,441,111	+				+0.3
2,441,112	-				+1.1