Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30625

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,246,554	+				-0.6
2,246,555	-				-2.3
2,246,555	-				+0.2
2,246,582	+				-0.3
2,246,583	-				-0.5
2,246,843	+				-0.5
2,246,843	+				+0.4
2,246,843	+				-0.0
2,246,850	+				+0.7
2,246,851	-				-0.0
2,246,900	+		RR42_RS30620	0.15	-0.0
2,246,900	+		RR42_RS30620	0.15	-1.4
2,246,900	+		RR42_RS30620	0.15	+0.7
2,246,900	+		RR42_RS30620	0.15	-0.8
2,246,900	+		RR42_RS30620	0.15	-0.0
2,246,900	+		RR42_RS30620	0.15	-0.7
2,246,901	-		RR42_RS30620	0.15	-1.1
2,246,932	+		RR42_RS30620	0.23	-0.2
2,246,933	-		RR42_RS30620	0.23	+1.3
2,246,966	+		RR42_RS30620	0.31	-0.5
2,246,967	-		RR42_RS30620	0.31	-1.0
2,246,967	-		RR42_RS30620	0.31	+0.6
2,246,967	-		RR42_RS30620	0.31	-1.5
2,246,967	-		RR42_RS30620	0.31	-0.5
2,246,968	+		RR42_RS30620	0.31	+0.8
2,246,968	+		RR42_RS30620	0.31	+1.4
2,247,059	+		RR42_RS30620	0.53	+0.1
2,247,059	+		RR42_RS30620	0.53	-0.8
2,247,059	+		RR42_RS30620	0.53	-1.6
2,247,060	-		RR42_RS30620	0.53	-0.7
2,247,060	-		RR42_RS30620	0.53	-1.5
2,247,060	-		RR42_RS30620	0.53	+0.4
2,247,079	-		RR42_RS30620	0.58	+1.6
2,247,079	-		RR42_RS30620	0.58	+0.3
2,247,091	+		RR42_RS30620	0.61	-0.4
2,247,092	-		RR42_RS30620	0.61	-0.6
2,247,162	+		RR42_RS30620	0.78	-1.3
2,247,162	+		RR42_RS30620	0.78	+0.7
2,247,162	+		RR42_RS30620	0.78	-0.9
2,247,162	+		RR42_RS30620	0.78	+1.5
2,247,163	-		RR42_RS30620	0.78	+0.2
2,247,163	-		RR42_RS30620	0.78	-1.8
2,247,163	-		RR42_RS30620	0.78	+0.3
2,247,222	-				-0.3
2,247,222	-				+1.5
2,247,287	+				+0.5
2,247,345	+				-1.0
2,247,345	+				+0.5
2,247,345	+				+0.1
2,247,345	+				-1.8
2,247,345	+				-1.0
2,247,345	+				-2.8
2,247,345	+				-2.5
2,247,345	+				+0.9
2,247,346	-				+0.3
2,247,346	-				+4.2
2,247,346	-				-0.2
2,247,346	-				-0.5
2,247,346	-				-0.5
2,247,346	-				-1.6
2,247,346	-				+0.5
2,247,346	-				+1.5
2,247,440	+				-1.0
2,247,440	+				+0.3
2,247,441	-				-1.0
2,247,441	-				-2.1
2,247,441	-				-1.1
2,247,574	+		RR42_RS30625	0.28	-0.2
2,247,923	-		RR42_RS30625	0.80	+0.2
2,247,959	+		RR42_RS30625	0.86	-0.0
2,247,959	+		RR42_RS30625	0.86	-1.4
2,248,151	-		RR42_RS30630	0.17	+0.4
2,248,151	-		RR42_RS30630	0.17	+0.5
2,248,151	-		RR42_RS30630	0.17	+2.6
2,248,151	-		RR42_RS30630	0.17	+0.6
2,248,213	+		RR42_RS30630	0.30	-1.0
2,248,213	+		RR42_RS30630	0.30	+1.0
2,248,213	+		RR42_RS30630	0.30	+0.3
2,248,214	-		RR42_RS30630	0.30	+0.1
2,248,214	-		RR42_RS30630	0.30	+0.1
2,248,214	-		RR42_RS30630	0.30	-3.3
2,248,219	+		RR42_RS30630	0.31	+1.5
2,248,219	+		RR42_RS30630	0.31	-1.9
2,248,219	+		RR42_RS30630	0.31	+0.2
2,248,220	-		RR42_RS30630	0.32	+1.5
2,248,237	+		RR42_RS30630	0.35	+0.0
2,248,237	+		RR42_RS30630	0.35	-0.5
2,248,376	-		RR42_RS30630	0.65	-1.0
2,248,575	+				-1.2
2,248,589	-				-0.6
2,248,594	+				-0.6
2,248,595	-				+0.7
2,248,658	+				+0.3
2,249,032	+				+0.2