Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30510

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,218,330	+		RR42_RS30505	0.24	+1.0
2,218,331	-		RR42_RS30505	0.24	-1.8
2,218,561	+		RR42_RS30505	0.44	-0.0
2,218,562	-		RR42_RS30505	0.44	-0.8
2,218,562	-		RR42_RS30505	0.44	-0.2
2,218,758	+		RR42_RS30505	0.60	+2.2
2,219,012	-		RR42_RS30505	0.81	-0.1
2,219,319	-				+2.1
2,219,559	-		RR42_RS30510	0.39	-0.2
2,219,606	+		RR42_RS30510	0.47	-1.8
2,219,606	+		RR42_RS30510	0.47	-0.8
2,219,735	+		RR42_RS30510	0.67	-0.3
2,219,822	+		RR42_RS30510	0.80	+0.2
2,219,822	+		RR42_RS30510	0.80	+0.2
2,219,822	+		RR42_RS30510	0.80	-0.1
2,219,822	+		RR42_RS30510	0.80	+0.3
2,219,823	-		RR42_RS30510	0.80	-0.0
2,219,937	+				-0.4
2,219,938	-				-2.0
2,219,938	-				-1.2
2,219,939	+				-4.3
2,220,089	-		RR42_RS30515	0.14	-1.2
2,220,119	-		RR42_RS30515	0.18	+0.4
2,220,401	+		RR42_RS30515	0.59	-2.3
2,220,402	-		RR42_RS30515	0.59	+0.4
2,220,445	+		RR42_RS30515	0.65	-2.0
2,220,446	-		RR42_RS30515	0.65	-1.6
2,220,451	+		RR42_RS30515	0.66	+0.1
2,220,451	+		RR42_RS30515	0.66	-1.2
2,220,451	+		RR42_RS30515	0.66	+1.5
2,220,452	-		RR42_RS30515	0.66	-1.8
2,220,452	-		RR42_RS30515	0.66	-0.3
2,220,452	-		RR42_RS30515	0.66	-0.5
2,220,452	-		RR42_RS30515	0.66	+1.1
2,220,589	+		RR42_RS30515	0.86	+1.0
2,220,590	-		RR42_RS30515	0.86	-1.3
2,220,674	+				-0.5
2,220,738	+				+0.8
2,220,738	+				-0.9
2,220,738	+				-1.0
2,220,738	+				-1.0
2,220,738	+				+0.0
2,220,739	-				-1.5
2,220,739	-				-1.6
2,220,793	-				-0.8
2,220,811	+				-2.5
2,220,946	+		RR42_RS30520	0.18	-0.9
2,220,946	+		RR42_RS30520	0.18	-0.2
2,220,946	+		RR42_RS30520	0.18	-0.8
2,220,947	-		RR42_RS30520	0.18	-0.2
2,220,947	-		RR42_RS30520	0.18	+0.2
2,220,947	-		RR42_RS30520	0.18	-0.8
2,220,947	-		RR42_RS30520	0.18	-0.2