Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS29425

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,955,869	+		RR42_RS29420	0.58	-0.8
1,955,869	+		RR42_RS29420	0.58	-1.0
1,955,870	-		RR42_RS29420	0.58	-2.2
1,956,089	+		RR42_RS29420	0.69	-1.0
1,956,090	-		RR42_RS29420	0.69	-2.5
1,956,127	+		RR42_RS29420	0.70	-2.0
1,956,127	+		RR42_RS29420	0.70	+1.0
1,956,127	+		RR42_RS29420	0.70	+0.3
1,956,241	+		RR42_RS29420	0.76	-0.0
1,956,242	-		RR42_RS29420	0.76	-2.7
1,956,309	-		RR42_RS29420	0.80	-0.3
1,956,787	+				+0.7
1,957,065	-		RR42_RS29425	0.33	-3.3
1,957,065	-		RR42_RS29425	0.33	+1.0
1,957,252	-		RR42_RS29425	0.57	-1.8
1,957,252	-		RR42_RS29425	0.57	-1.6
1,957,252	-		RR42_RS29425	0.57	-0.2
1,957,439	+		RR42_RS29425	0.81	-2.0
1,957,439	+		RR42_RS29425	0.81	-1.3
1,957,440	-		RR42_RS29425	0.81	+0.7
1,957,440	-		RR42_RS29425	0.81	-0.9
1,957,440	-		RR42_RS29425	0.81	+0.6
1,957,487	+		RR42_RS29425	0.87	-0.2
1,957,489	+		RR42_RS29425	0.87	-1.6
1,957,586	+				+1.6
1,957,587	-				-2.2
1,957,587	-				-1.3
1,957,660	+				-0.6
1,957,660	+				+0.5
1,957,805	+				+0.3
1,957,805	+				-0.5
1,957,806	-				-0.5
1,957,964	-		RR42_RS29430	0.16	+0.6
1,958,020	+		RR42_RS29430	0.19	-0.1
1,958,021	-		RR42_RS29430	0.20	-2.0
1,958,043	-		RR42_RS29430	0.21	+0.6
1,958,043	-		RR42_RS29430	0.21	+0.1
1,958,204	+		RR42_RS29430	0.32	-0.1
1,958,204	+		RR42_RS29430	0.32	+0.3
1,958,204	+		RR42_RS29430	0.32	+0.2
1,958,205	-		RR42_RS29430	0.32	+1.0
1,958,205	-		RR42_RS29430	0.32	+0.5
1,958,205	-		RR42_RS29430	0.32	+0.2
1,958,205	-		RR42_RS29430	0.32	-1.0