Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28775

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,804,352	-				-0.3
1,804,386	+				-0.7
1,804,387	-				+0.4
1,804,435	-				+1.9
1,804,503	+		RR42_RS28770	0.16	-0.0
1,804,503	+		RR42_RS28770	0.16	+1.5
1,804,503	+		RR42_RS28770	0.16	+1.4
1,804,504	-		RR42_RS28770	0.16	+1.0
1,804,609	+		RR42_RS28770	0.30	+1.4
1,804,701	+		RR42_RS28770	0.43	-0.8
1,804,752	-		RR42_RS28770	0.50	+2.3
1,804,761	+		RR42_RS28770	0.51	-2.0
1,804,824	+		RR42_RS28770	0.59	-0.5
1,804,932	+		RR42_RS28770	0.74	+1.0
1,804,932	+		RR42_RS28770	0.74	-1.1
1,804,933	-		RR42_RS28770	0.74	+0.4
1,804,933	-		RR42_RS28770	0.74	-2.2
1,804,974	+		RR42_RS28770	0.80	+0.1
1,804,975	-		RR42_RS28770	0.80	-1.6
1,804,975	-		RR42_RS28770	0.80	-0.5
1,805,092	+				-0.6
1,805,094	+				+0.3
1,805,095	-				-1.5
1,805,114	+				+0.6
1,805,114	+				+1.2
1,805,114	+				+0.2
1,805,114	+				-0.3
1,805,115	-				-0.1
1,805,115	-				-0.5
1,805,115	-				-1.5
1,805,115	-				-0.4
1,805,115	-				-0.6
1,805,265	-				+0.1
1,805,285	+				-1.0
1,805,285	+				+1.4
1,805,286	-				+1.1
1,805,286	-				-2.3
1,805,286	-				+0.0
1,805,291	+				+0.6
1,805,291	+				+0.5
1,805,292	-				+1.4
1,805,332	-				-1.3
1,805,422	+		RR42_RS28775	0.12	+0.7
1,805,422	+		RR42_RS28775	0.12	+0.5
1,805,422	+		RR42_RS28775	0.12	+0.5
1,805,422	+		RR42_RS28775	0.12	+0.1
1,805,423	-		RR42_RS28775	0.12	-0.4
1,805,472	+		RR42_RS28775	0.19	+0.5
1,805,473	-		RR42_RS28775	0.20	-1.3
1,805,473	-		RR42_RS28775	0.20	-0.2
1,805,473	-		RR42_RS28775	0.20	+0.9
1,806,139	+				-2.0
1,806,139	+				-1.4
1,806,140	-				-0.5
1,806,140	-				+0.3
1,806,140	-				+1.0
1,806,498	+		RR42_RS28780	0.16	-0.2
1,806,498	+		RR42_RS28780	0.16	-0.8
1,806,559	-		RR42_RS28780	0.19	-2.2
1,806,559	-		RR42_RS28780	0.19	-0.1
1,806,666	+		RR42_RS28780	0.22	+0.2
1,806,667	-		RR42_RS28780	0.22	-1.3
1,806,751	-		RR42_RS28780	0.25	+0.6
1,806,751	-		RR42_RS28780	0.25	-0.6
1,806,955	+		RR42_RS28780	0.33	-0.8
1,806,955	+		RR42_RS28780	0.33	-0.8