Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28730

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,795,881	+				+0.5
1,795,882	-				+1.0
1,795,882	-				+2.6
1,795,882	-				-1.3
1,795,909	+				-0.0
1,796,041	+		RR42_RS28725	0.23	-0.6
1,796,175	+		RR42_RS28725	0.39	+0.1
1,796,175	+		RR42_RS28725	0.39	-0.5
1,796,175	+		RR42_RS28725	0.39	-2.2
1,796,176	-		RR42_RS28725	0.39	-0.5
1,796,176	-		RR42_RS28725	0.39	+0.9
1,796,176	-		RR42_RS28725	0.39	-0.9
1,796,408	-		RR42_RS28725	0.66	-0.6
1,796,505	+		RR42_RS28725	0.77	+0.3
1,796,505	+		RR42_RS28725	0.77	+0.5
1,796,505	+		RR42_RS28725	0.77	+0.6
1,796,505	+		RR42_RS28725	0.77	-0.4
1,796,506	-		RR42_RS28725	0.77	+0.4
1,796,506	-		RR42_RS28725	0.77	+0.2
1,796,506	-		RR42_RS28725	0.77	-1.0
1,796,506	-		RR42_RS28725	0.77	-0.1
1,796,506	-		RR42_RS28725	0.77	+0.3
1,796,514	+		RR42_RS28725	0.78	+0.1
1,796,514	+		RR42_RS28725	0.78	+0.4
1,796,514	+		RR42_RS28725	0.78	-0.0
1,796,515	-		RR42_RS28725	0.78	-0.6
1,796,515	-		RR42_RS28725	0.78	+0.5
1,796,515	-		RR42_RS28725	0.78	+0.3
1,796,610	+		RR42_RS28725	0.89	+0.3
1,796,610	+		RR42_RS28725	0.89	+0.7
1,796,610	+		RR42_RS28725	0.89	-0.4
1,796,610	+		RR42_RS28725	0.89	-1.9
1,796,611	-		RR42_RS28725	0.89	+0.3
1,796,611	-		RR42_RS28725	0.89	-1.7
1,796,611	-		RR42_RS28725	0.89	+0.1
1,796,613	+		RR42_RS28725	0.89	+2.8
1,796,613	+		RR42_RS28725	0.89	-1.9
1,796,613	+		RR42_RS28725	0.89	+1.5
1,796,614	-		RR42_RS28725	0.89	-0.6
1,796,643	+				+0.4
1,796,643	+				-0.9
1,796,643	+				+2.4
1,796,643	+				+0.1
1,796,644	-				-0.2
1,796,644	-				+0.1
1,796,644	-				-0.0
1,796,644	-				-0.6
1,796,644	-				-2.3
1,796,951	+		RR42_RS28730	0.24	-0.4
1,796,951	+		RR42_RS28730	0.24	-0.6
1,796,951	+		RR42_RS28730	0.24	-0.1
1,796,952	-		RR42_RS28730	0.25	-0.7
1,796,952	-		RR42_RS28730	0.25	+0.5
1,796,952	-		RR42_RS28730	0.25	-0.2
1,797,230	+		RR42_RS28730	0.52	-0.5
1,797,524	+		RR42_RS28730	0.81	+1.5
1,797,524	+		RR42_RS28730	0.81	-0.5
1,797,524	+		RR42_RS28730	0.81	-0.6
1,797,524	+		RR42_RS28730	0.81	-0.2
1,797,525	-		RR42_RS28730	0.81	-1.7
1,797,593	+		RR42_RS28730	0.88	-0.7
1,797,594	-		RR42_RS28730	0.88	-2.9
1,797,732	+				-0.9
1,797,733	-				-0.3
1,797,934	+		RR42_RS28735	0.29	+0.9
1,797,935	-		RR42_RS28735	0.29	-0.7
1,797,967	+		RR42_RS28735	0.33	+0.2
1,797,968	-		RR42_RS28735	0.34	+0.2
1,797,968	-		RR42_RS28735	0.34	+1.9
1,798,341	-		RR42_RS28735	0.83	-0.1
1,798,341	-		RR42_RS28735	0.83	-0.5
1,798,439	+				-2.2
1,798,439	+				-1.6
1,798,441	+				+0.1
1,798,442	-				-2.5