Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28560

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,761,970	-				+1.0
1,761,984	+				-1.3
1,761,984	+				+0.0
1,761,984	+				+1.7
1,761,985	-				+1.0
1,762,042	+				+0.9
1,762,043	-				+0.2
1,762,462	+				+0.0
1,762,527	+				+1.2
1,762,551	+				+0.6
1,762,698	-		RR42_RS28560	0.17	+0.0
1,762,772	+		RR42_RS28560	0.22	+0.1
1,762,773	-		RR42_RS28560	0.22	+1.6
1,762,803	+		RR42_RS28560	0.24	+0.0
1,762,803	+		RR42_RS28560	0.24	+0.2
1,762,803	+		RR42_RS28560	0.24	-1.6
1,762,979	+		RR42_RS28560	0.35	+1.1
1,762,980	-		RR42_RS28560	0.35	+1.6
1,763,067	-		RR42_RS28560	0.41	+1.0
1,763,067	-		RR42_RS28560	0.41	+0.4
1,763,236	-		RR42_RS28560	0.52	-0.1
1,763,236	-		RR42_RS28560	0.52	-0.3
1,763,535	+		RR42_RS28560	0.72	+1.0
1,763,539	+		RR42_RS28560	0.72	+1.5
1,763,681	-		RR42_RS28560	0.81	-1.8
1,763,721	+		RR42_RS28560	0.84	+1.5
1,763,721	+		RR42_RS28560	0.84	-1.3
1,763,983	+				-1.3
1,763,983	+				+1.7
1,764,088	+				+2.1
1,764,134	-				-0.1
1,764,145	+				+0.7
1,764,209	-		RR42_RS28565	0.15	-0.4
1,764,209	-		RR42_RS28565	0.15	+0.6
1,764,209	-		RR42_RS28565	0.15	+0.2
1,764,209	-		RR42_RS28565	0.15	+1.3
1,764,209	-		RR42_RS28565	0.15	-0.3
1,764,845	-		RR42_RS28565	0.71	-0.7