Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS27685

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,572,611	+		RR42_RS27680	0.42	+0.2
1,572,612	-		RR42_RS27680	0.42	-0.7
1,572,612	-		RR42_RS27680	0.42	+1.0
1,572,612	-		RR42_RS27680	0.42	+0.2
1,572,613	+		RR42_RS27680	0.42	+0.8
1,572,718	-		RR42_RS27680	0.51	-2.6
1,572,734	+		RR42_RS27680	0.52	-1.1
1,572,735	-		RR42_RS27680	0.52	+0.5
1,572,773	+		RR42_RS27680	0.55	+0.1
1,572,863	+		RR42_RS27680	0.62	-0.6
1,572,977	+		RR42_RS27680	0.71	-0.4
1,572,977	+		RR42_RS27680	0.71	+2.2
1,572,978	-		RR42_RS27680	0.71	-0.4
1,572,978	-		RR42_RS27680	0.71	-0.6
1,572,978	-		RR42_RS27680	0.71	-0.6
1,573,100	+		RR42_RS27680	0.81	-0.4
1,573,464	+				+0.3
1,573,464	+				-1.7
1,573,465	-				-0.3
1,573,601	+				-2.7
1,573,602	-				-1.2
1,573,602	-				+0.4
1,573,663	+				-2.6
1,573,803	+				-1.3
1,573,803	+				-0.0
1,573,803	+				+0.8
1,573,803	+				-1.0
1,573,803	+				+1.5
1,573,804	-				-0.3
1,573,804	-				-2.0
1,573,804	-				-1.0
1,573,804	-				-0.3
1,573,804	-				+1.5
1,573,804	-				+2.6
1,573,804	-				-0.9
1,573,823	+				-1.2
1,574,031	+		RR42_RS27685	0.14	-0.2
1,574,032	-		RR42_RS27685	0.15	+0.9
1,574,032	-		RR42_RS27685	0.15	-2.5
1,574,032	-		RR42_RS27685	0.15	-0.4
1,574,043	+		RR42_RS27685	0.15	-0.6
1,574,044	-		RR42_RS27685	0.15	-0.8
1,574,122	-		RR42_RS27685	0.17	+1.0
1,574,122	-		RR42_RS27685	0.17	+1.0
1,574,358	+		RR42_RS27685	0.25	-0.6
1,574,400	+		RR42_RS27685	0.26	+0.7
1,574,401	-		RR42_RS27685	0.26	+0.7
1,574,401	-		RR42_RS27685	0.26	-1.1
1,574,544	+		RR42_RS27685	0.31	+0.6
1,574,544	+		RR42_RS27685	0.31	+0.1
1,574,545	-		RR42_RS27685	0.31	+0.6
1,574,545	-		RR42_RS27685	0.31	+0.2
1,574,556	+		RR42_RS27685	0.31	+1.6
1,574,582	+		RR42_RS27685	0.32	-0.7
1,574,583	-		RR42_RS27685	0.32	-0.6
1,574,603	+		RR42_RS27685	0.32	+0.7
1,574,604	-		RR42_RS27685	0.32	+0.9
1,574,604	-		RR42_RS27685	0.32	-0.5
1,574,604	-		RR42_RS27685	0.32	-2.2
1,574,604	-		RR42_RS27685	0.32	-1.0
1,574,868	+		RR42_RS27685	0.41	+0.2
1,574,869	-		RR42_RS27685	0.41	+0.3
1,574,869	-		RR42_RS27685	0.41	+0.6
1,575,172	-		RR42_RS27685	0.50	-0.8
1,575,226	-		RR42_RS27685	0.52	+0.7
1,575,303	+		RR42_RS27685	0.54	-0.7
1,575,747	+		RR42_RS27685	0.68	-1.0
1,575,747	+		RR42_RS27685	0.68	-0.6
1,575,748	-		RR42_RS27685	0.68	-1.0
1,575,748	-		RR42_RS27685	0.68	+1.2
1,575,847	-		RR42_RS27685	0.71	-0.6
1,575,861	+		RR42_RS27685	0.72	+0.3
1,575,862	-		RR42_RS27685	0.72	+0.9
1,575,894	+		RR42_RS27685	0.73	-0.1
1,575,895	-		RR42_RS27685	0.73	-2.9
1,576,340	-		RR42_RS27685	0.87	+0.3
1,576,340	-		RR42_RS27685	0.87	+0.4
1,576,665	+				+1.6
1,576,665	+				+0.1
1,576,666	-				-0.6
1,576,666	-				-0.2
1,576,758	+				+1.0
1,576,758	+				+0.9
1,576,759	-				-0.7
1,576,807	-				-0.1
1,576,883	+				-0.1
1,576,923	-				+1.4
1,577,261	+		RR42_RS27690	0.31	+1.4
1,577,262	-		RR42_RS27690	0.31	+0.6