Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS27660
Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM |
---|---|---|---|---|---|
remove | |||||
1,567,478 | + | -0.6 | |||
1,567,652 | + | RR42_RS27655 | 0.21 | -0.9 | |
1,568,072 | + | RR42_RS27655 | 0.73 | +0.2 | |
1,568,073 | - | RR42_RS27655 | 0.73 | -0.6 | |
1,568,073 | - | RR42_RS27655 | 0.73 | -1.1 | |
1,568,142 | - | RR42_RS27655 | 0.81 | -0.4 | |
1,568,315 | + | +0.2 | |||
1,568,368 | - | -0.8 | |||
1,568,368 | - | +1.3 | |||
1,568,418 | + | -1.5 | |||
1,568,715 | + | RR42_RS27660 | 0.45 | -2.3 | |
1,569,096 | + | -0.4 | |||
1,569,239 | + | +0.2 | |||
1,569,239 | + | -1.1 | |||
1,569,239 | + | +0.2 | |||
1,569,320 | + | RR42_RS27665 | 0.14 | -0.9 | |
1,569,321 | - | RR42_RS27665 | 0.14 | -2.8 | |
1,569,341 | + | RR42_RS27665 | 0.18 | -1.0 | |
1,569,342 | - | RR42_RS27665 | 0.18 | +0.2 | |
1,569,894 | + | RR42_RS27670 | 0.15 | -2.2 | |
1,569,894 | + | RR42_RS27670 | 0.15 | +0.8 | |
1,569,895 | - | RR42_RS27670 | 0.15 | -0.5 | |
1,569,923 | - | RR42_RS27670 | 0.18 | -0.4 | |
1,570,030 | - | RR42_RS27670 | 0.29 | -2.2 |
Or see this region's nucleotide sequence