Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS26945

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,399,450	+		RR42_RS26940	0.46	-0.4
1,399,466	+		RR42_RS26940	0.47	-0.1
1,399,466	+		RR42_RS26940	0.47	-4.0
1,399,466	+				-2.6
1,399,466	+		RR42_RS26940	0.47	+0.2
1,399,467	-		RR42_RS26940	0.47	+0.8
1,399,467	-		RR42_RS26940	0.47	+1.6
1,399,467	-		RR42_RS26940	0.47	-0.4
1,399,467	-		RR42_RS26940	0.47	+0.9
1,399,467	-		RR42_RS26940	0.47	-0.7
1,399,468	+		RR42_RS26940	0.47	+0.4
1,399,469	-		RR42_RS26940	0.47	+0.6
1,399,469	-		RR42_RS26940	0.47	+0.8
1,399,742	+		RR42_RS26940	0.68	-0.5
1,399,742	+		RR42_RS26940	0.68	-0.7
1,399,742	+		RR42_RS26940	0.68	+0.1
1,399,742	+		RR42_RS26940	0.68	+0.7
1,399,784	-		RR42_RS26940	0.71	+0.5
1,399,784	-		RR42_RS26940	0.71	+0.0
1,399,960	+		RR42_RS26940	0.85	+0.4
1,399,978	+		RR42_RS26940	0.86	+0.4
1,399,978	+		RR42_RS26940	0.86	-1.8
1,399,979	-		RR42_RS26940	0.86	+0.2
1,400,148	+				+1.0
1,400,148	+				+0.2
1,400,148	+				+1.8
1,400,149	-				-0.1
1,400,149	-				+0.3
1,400,149	-				-0.0
1,400,149	-				-0.2
1,400,151	-				-1.2
1,400,224	+				-1.0
1,400,224	+				-0.8
1,400,240	+				-0.2
1,400,240	+				+1.4
1,400,241	-				+2.5
1,400,397	+				+0.3
1,400,397	+				+0.6
1,400,397	+				-1.4
1,400,398	-		RR42_RS26945	0.10	+0.1
1,400,460	+		RR42_RS26945	0.17	-0.5
1,400,460	+		RR42_RS26945	0.17	-0.3
1,400,461	-		RR42_RS26945	0.17	-0.4
1,400,461	-		RR42_RS26945	0.17	+0.5
1,400,461	-		RR42_RS26945	0.17	+0.5
1,400,463	+		RR42_RS26945	0.17	-0.9
1,400,464	-		RR42_RS26945	0.17	+0.8
1,400,529	+		RR42_RS26945	0.25	-0.4
1,400,530	-		RR42_RS26945	0.25	-0.3
1,400,530	-		RR42_RS26945	0.25	-0.3
1,400,604	-		RR42_RS26945	0.33	+0.6
1,401,286	-				+0.4
1,401,311	+				+0.4
1,401,312	-				+0.1
1,401,327	+				-2.1
1,401,327	+				+1.6
1,401,383	-				-0.6
1,401,661	+		RR42_RS26950	0.34	+0.5
1,401,779	+		RR42_RS26950	0.59	-0.4
1,401,780	-		RR42_RS26950	0.59	+1.5
1,401,892	+		RR42_RS26950	0.83	-2.0
1,401,892	+		RR42_RS26950	0.83	+0.7
1,401,893	-		RR42_RS26950	0.83	-1.4
1,402,002	+				+1.3
1,402,002	+				+0.4
1,402,003	-				+0.2
1,402,003	-				-0.2
1,402,003	-				-0.9
1,402,003	-				-1.1
1,402,112	+				-1.8
1,402,112	+				+0.2
1,402,113	-				-1.1
1,402,113	-				-2.3