Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS26310 and RR42_RS26315 are separated by 11 nucleotides RR42_RS26315 and RR42_RS26320 are separated by 163 nucleotides
RR42_RS26310: RR42_RS26310 - microcystin LR degradation protein MlrC, at 1,262,187 to 1,263,644
_RS26310
RR42_RS26315: RR42_RS26315 - MFS transporter, at 1,263,656 to 1,264,642
_RS26315
RR42_RS26320: RR42_RS26320 - LysR family transcriptional regulator, at 1,264,806 to 1,265,723
_RS26320
Position (kb) 1263
1264
1265 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1262.905 kb on + strand, within RR42_RS26310 at 1263.016 kb on + strand, within RR42_RS26310 at 1263.016 kb on + strand, within RR42_RS26310 at 1263.016 kb on + strand, within RR42_RS26310 at 1263.016 kb on + strand, within RR42_RS26310 at 1263.016 kb on + strand, within RR42_RS26310 at 1263.016 kb on + strand, within RR42_RS26310 at 1263.016 kb on + strand, within RR42_RS26310 at 1263.016 kb on + strand, within RR42_RS26310 at 1263.017 kb on - strand, within RR42_RS26310 at 1263.017 kb on - strand, within RR42_RS26310 at 1263.017 kb on - strand, within RR42_RS26310 at 1263.117 kb on + strand, within RR42_RS26310 at 1263.117 kb on + strand, within RR42_RS26310 at 1263.172 kb on + strand, within RR42_RS26310 at 1263.173 kb on - strand, within RR42_RS26310 at 1263.406 kb on + strand, within RR42_RS26310 at 1263.407 kb on - strand, within RR42_RS26310 at 1263.557 kb on - strand at 1263.632 kb on + strand at 1263.658 kb on - strand at 1263.829 kb on + strand, within RR42_RS26315 at 1263.830 kb on - strand, within RR42_RS26315 at 1263.873 kb on + strand, within RR42_RS26315 at 1263.874 kb on - strand, within RR42_RS26315 at 1264.084 kb on - strand, within RR42_RS26315 at 1264.201 kb on - strand, within RR42_RS26315 at 1264.201 kb on - strand, within RR42_RS26315 at 1264.201 kb on - strand, within RR42_RS26315 at 1264.201 kb on - strand, within RR42_RS26315 at 1264.323 kb on + strand, within RR42_RS26315 at 1264.359 kb on - strand, within RR42_RS26315 at 1264.359 kb on - strand, within RR42_RS26315 at 1264.371 kb on + strand, within RR42_RS26315 at 1264.371 kb on + strand, within RR42_RS26315 at 1264.371 kb on + strand, within RR42_RS26315 at 1264.372 kb on - strand, within RR42_RS26315 at 1264.521 kb on + strand, within RR42_RS26315 at 1264.555 kb on - strand at 1264.693 kb on + strand at 1264.694 kb on - strand at 1264.723 kb on + strand at 1264.723 kb on + strand at 1264.724 kb on - strand at 1264.839 kb on + strand at 1264.945 kb on + strand, within RR42_RS26320 at 1264.946 kb on - strand, within RR42_RS26320 at 1265.166 kb on + strand, within RR42_RS26320 at 1265.509 kb on - strand, within RR42_RS26320
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM remove 1,262,905 + RR42_RS26310 0.49 +1.1 1,263,016 + RR42_RS26310 0.57 +0.2 1,263,016 + RR42_RS26310 0.57 -0.1 1,263,016 + RR42_RS26310 0.57 +1.1 1,263,016 + RR42_RS26310 0.57 +0.5 1,263,016 + RR42_RS26310 0.57 -0.8 1,263,016 + RR42_RS26310 0.57 -1.3 1,263,016 + RR42_RS26310 0.57 +0.7 1,263,016 + RR42_RS26310 0.57 +0.9 1,263,017 - RR42_RS26310 0.57 -1.1 1,263,017 - RR42_RS26310 0.57 +0.4 1,263,017 - RR42_RS26310 0.57 -2.8 1,263,117 + RR42_RS26310 0.64 +0.7 1,263,117 + RR42_RS26310 0.64 -0.6 1,263,172 + RR42_RS26310 0.68 +1.0 1,263,173 - RR42_RS26310 0.68 -0.2 1,263,406 + RR42_RS26310 0.84 +0.5 1,263,407 - RR42_RS26310 0.84 +0.3 1,263,557 - -0.4 1,263,632 + -1.1 1,263,658 - -2.3 1,263,829 + RR42_RS26315 0.18 +0.3 1,263,830 - RR42_RS26315 0.18 -0.3 1,263,873 + RR42_RS26315 0.22 +1.2 1,263,874 - RR42_RS26315 0.22 -2.1 1,264,084 - RR42_RS26315 0.43 +1.1 1,264,201 - RR42_RS26315 0.55 -1.5 1,264,201 - RR42_RS26315 0.55 -0.1 1,264,201 - RR42_RS26315 0.55 -0.2 1,264,201 - RR42_RS26315 0.55 -0.5 1,264,323 + RR42_RS26315 0.68 -0.3 1,264,359 - RR42_RS26315 0.71 -0.8 1,264,359 - RR42_RS26315 0.71 +1.9 1,264,371 + RR42_RS26315 0.72 +0.5 1,264,371 + RR42_RS26315 0.72 -1.1 1,264,371 + RR42_RS26315 0.72 -0.9 1,264,372 - RR42_RS26315 0.73 -0.5 1,264,521 + RR42_RS26315 0.88 -0.2 1,264,555 - -1.1 1,264,693 + +0.1 1,264,694 - -2.5 1,264,723 + -0.4 1,264,723 + -0.1 1,264,724 - -2.3 1,264,839 + +0.1 1,264,945 + RR42_RS26320 0.15 -1.7 1,264,946 - RR42_RS26320 0.15 +0.2 1,265,166 + RR42_RS26320 0.39 -0.3 1,265,509 - RR42_RS26320 0.77 -0.3
Or see this region's nucleotide sequence