Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS26290

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,256,674	+				-0.7
1,256,674	+				-0.1
1,256,674	+				-2.0
1,256,675	-				-0.9
1,256,675	-				-0.6
1,256,675	-				-2.0
1,256,675	-				-0.3
1,256,687	+				+0.0
1,256,768	+				+0.0
1,256,768	+				-0.1
1,256,768	+				-1.1
1,256,768	+				+0.1
1,256,769	-				-0.2
1,256,769	-				+0.9
1,256,769	-				-2.3
1,256,769	-				+0.2
1,256,887	+				-1.5
1,256,887	+				-2.3
1,256,888	-				-2.0
1,257,004	+		RR42_RS26285	0.26	+0.2
1,257,004	+		RR42_RS26285	0.26	-0.6
1,257,004	+		RR42_RS26285	0.26	+0.7
1,257,005	-		RR42_RS26285	0.26	-1.0
1,257,172	+		RR42_RS26285	0.58	-0.6
1,257,331	-		RR42_RS26285	0.89	+0.2
1,257,536	+				+0.3
1,257,536	+				-0.3
1,257,536	+				+0.2
1,257,736	-				-2.0
1,257,736	-				+0.3
1,257,780	+				-0.4
1,257,780	+				+0.3
1,257,780	+				-0.2
1,257,780	+				-0.0
1,257,781	-				-1.1
1,257,781	-				-0.6
1,257,781	-				-0.7
1,257,781	-				-0.2
1,257,830	+		RR42_RS26290	0.12	+0.3
1,257,830	+		RR42_RS26290	0.12	-0.4
1,257,830	+		RR42_RS26290	0.12	-1.0
1,257,831	-		RR42_RS26290	0.12	+1.2
1,257,831	-		RR42_RS26290	0.12	-0.5
1,257,831	-		RR42_RS26290	0.12	+1.3
1,257,897	+		RR42_RS26290	0.17	+0.7
1,257,897	+		RR42_RS26290	0.17	-1.3
1,257,898	-		RR42_RS26290	0.18	+2.0
1,258,029	+		RR42_RS26290	0.28	-0.5
1,258,029	+		RR42_RS26290	0.28	-0.3
1,258,030	-		RR42_RS26290	0.28	-1.4
1,258,030	-		RR42_RS26290	0.28	+0.7
1,258,030	-		RR42_RS26290	0.28	+0.3
1,258,030	-		RR42_RS26290	0.28	+1.1
1,258,030	-		RR42_RS26290	0.28	-0.0
1,258,089	+		RR42_RS26290	0.32	-0.9
1,258,089	+		RR42_RS26290	0.32	+0.6
1,258,098	+		RR42_RS26290	0.33	+0.9
1,258,099	-		RR42_RS26290	0.33	+1.3
1,258,296	+		RR42_RS26290	0.48	-0.1
1,258,477	-		RR42_RS26290	0.61	+2.0
1,258,539	-		RR42_RS26290	0.66	+0.4
1,258,860	+				-2.2
1,258,861	-				-0.6
1,258,861	-				+1.1
1,258,861	-				-1.5
1,258,861	-				-0.5
1,258,861	-				+0.2
1,258,861	-				+0.5
1,258,953	+				+0.2
1,258,953	+				+0.3
1,258,953	+				+0.0
1,258,954	-				-0.4
1,258,954	-				+0.0
1,258,955	+				-0.9
1,258,955	+				+1.5
1,258,956	-				+1.2
1,258,956	-				-0.8
1,258,983	+				-1.4
1,258,997	-				-0.1
1,259,041	+				+0.2
1,259,042	-				+0.7
1,259,131	-				-0.4
1,259,131	-				+0.6
1,259,189	-				-0.5
1,259,323	+		RR42_RS26295	0.28	+0.1
1,259,323	+		RR42_RS26295	0.28	-1.5
1,259,324	-		RR42_RS26295	0.28	+0.6
1,259,324	-		RR42_RS26295	0.28	-0.4
1,259,324	-		RR42_RS26295	0.28	+1.0
1,259,394	+		RR42_RS26295	0.38	+0.8
1,259,394	+		RR42_RS26295	0.38	+0.3
1,259,398	+		RR42_RS26295	0.38	+0.2
1,259,399	-		RR42_RS26295	0.38	+0.3
1,259,399	-		RR42_RS26295	0.38	+1.2
1,259,399	-		RR42_RS26295	0.38	+1.4
1,259,602	-		RR42_RS26295	0.66	+1.6
1,259,654	-		RR42_RS26295	0.73	+0.7
1,259,654	-		RR42_RS26295	0.73	+0.5
1,259,654	-		RR42_RS26295	0.73	+0.4
1,259,680	+		RR42_RS26295	0.77	+1.8
1,259,681	-		RR42_RS26295	0.77	-0.1
1,259,872	-				-1.5
1,259,893	+				+0.6
1,259,948	-				-1.2