Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25890

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,148,454	+		RR42_RS25885	0.35	-1.1
1,148,590	+		RR42_RS25885	0.47	+0.2
1,148,591	-		RR42_RS25885	0.47	+0.4
1,148,627	+		RR42_RS25885	0.50	-1.3
1,148,628	-		RR42_RS25885	0.50	+0.2
1,148,639	+		RR42_RS25885	0.51	-0.2
1,148,776	+		RR42_RS25885	0.63	-0.2
1,148,777	-		RR42_RS25885	0.63	-1.6
1,148,777	-		RR42_RS25885	0.63	-1.7
1,149,153	+				+0.3
1,149,154	-				-0.1
1,149,154	-				-0.2
1,149,197	+				-2.2
1,149,363	+				+0.2
1,149,363	+				+1.0
1,149,363	+				+0.7
1,149,558	-		RR42_RS25890	0.10	+0.3
1,149,558	-		RR42_RS25890	0.10	+0.3
1,149,609	-		RR42_RS25890	0.15	-0.6
1,149,650	-		RR42_RS25890	0.19	-0.0
1,149,657	+		RR42_RS25890	0.19	+0.7
1,149,658	-		RR42_RS25890	0.19	+0.4
1,149,658	-		RR42_RS25890	0.19	+1.3
1,149,691	-		RR42_RS25890	0.22	-3.5
1,149,867	+		RR42_RS25890	0.38	+0.5
1,149,867	+		RR42_RS25890	0.38	+0.1
1,149,867	+		RR42_RS25890	0.38	+1.0
1,150,011	+		RR42_RS25890	0.52	+0.9
1,150,011	+		RR42_RS25890	0.52	-0.4
1,150,011	+		RR42_RS25890	0.52	+0.0
1,150,012	-		RR42_RS25890	0.52	+2.6
1,150,062	+		RR42_RS25890	0.56	+0.2
1,150,063	-		RR42_RS25890	0.56	-0.2
1,150,218	-		RR42_RS25890	0.71	-1.3
1,150,218	-		RR42_RS25890	0.71	+1.6
1,150,391	-		RR42_RS25890	0.86	-1.4
1,150,537	-				-0.2
1,150,570	+				-1.4
1,150,570	+				+1.0
1,150,570	+				+0.4
1,150,570	+				+0.3
1,150,570	+				-1.0
1,150,571	-				-0.2
1,150,571	-				+1.0
1,150,764	-				-2.1
1,150,884	-		RR42_RS25895	0.25	-1.0
1,150,898	+		RR42_RS25895	0.27	-1.4
1,150,898	+		RR42_RS25895	0.27	+2.8
1,151,206	+		RR42_RS25895	0.67	+0.8
1,151,300	+		RR42_RS25895	0.79	+1.0
1,151,301	-		RR42_RS25895	0.79	-0.6