Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25575

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,081,465	+		RR42_RS25570	0.44	+0.2
1,081,465	+		RR42_RS25570	0.44	+0.6
1,081,848	+		RR42_RS25570	0.67	-3.3
1,081,936	+		RR42_RS25570	0.72	-2.9
1,081,936	+		RR42_RS25570	0.72	+0.7
1,082,211	-		RR42_RS25570	0.89	-0.6
1,082,234	-				+0.9
1,082,234	-				+0.1
1,082,429	-				-1.6
1,082,429	-				+0.1
1,082,433	-				-0.2
1,082,449	+				-0.5
1,082,449	+				+1.6
1,082,449	+				-3.0
1,082,450	-				-0.3
1,082,450	-				-3.5
1,082,778	+		RR42_RS25575	0.44	+0.9
1,082,847	-		RR42_RS25575	0.53	-0.9
1,082,847	-		RR42_RS25575	0.53	-1.1
1,082,867	-		RR42_RS25575	0.56	+0.5
1,082,875	+		RR42_RS25575	0.57	+0.1
1,082,876	-		RR42_RS25575	0.57	+1.1
1,082,876	-		RR42_RS25575	0.57	-0.9
1,082,883	+		RR42_RS25575	0.58	+0.6
1,082,883	+		RR42_RS25575	0.58	-3.0
1,082,942	-		RR42_RS25575	0.66	-1.1
1,082,976	-		RR42_RS25575	0.70	+0.9
1,082,976	-		RR42_RS25575	0.70	+0.4
1,082,976	-		RR42_RS25575	0.70	+0.2
1,083,010	+		RR42_RS25575	0.75	+0.0
1,083,010	+		RR42_RS25575	0.75	-3.0
1,083,011	-		RR42_RS25575	0.75	+0.9
1,083,177	+				+0.7
1,083,328	-				-3.6
1,083,350	+				-1.4
1,083,350	+				+0.5
1,083,351	-				+0.8
1,083,431	+		RR42_RS25580	0.21	-1.0
1,083,432	-		RR42_RS25580	0.21	-0.1
1,083,432	-		RR42_RS25580	0.21	-0.9
1,083,668	-		RR42_RS25580	0.54	-2.6
1,083,705	+		RR42_RS25580	0.60	+1.7
1,083,746	+		RR42_RS25580	0.65	+2.0
1,083,746	+		RR42_RS25580	0.65	+1.1
1,083,747	-		RR42_RS25580	0.66	-0.6
1,083,875	+		RR42_RS25580	0.84	-0.3
1,083,875	+		RR42_RS25580	0.84	-0.4
1,083,876	-		RR42_RS25580	0.84	-1.3
1,083,876	-		RR42_RS25580	0.84	+3.1
1,084,116	+				-1.3
1,084,116	+				-0.4
1,084,117	-				-0.4
1,084,131	+				+0.5
1,084,199	+				-1.4