Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25550

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,075,988	+		RR42_RS25545	0.26	-1.0
1,075,988	+		RR42_RS25545	0.26	+0.5
1,075,989	-		RR42_RS25545	0.26	-1.6
1,075,989	-		RR42_RS25545	0.26	+0.2
1,076,031	-		RR42_RS25545	0.30	-0.0
1,076,170	-		RR42_RS25545	0.44	-0.4
1,076,196	+		RR42_RS25545	0.47	-1.1
1,076,196	+		RR42_RS25545	0.47	-0.7
1,076,241	+		RR42_RS25545	0.51	+0.1
1,076,242	-		RR42_RS25545	0.51	+0.4
1,076,278	-		RR42_RS25545	0.55	-0.3
1,076,310	-		RR42_RS25545	0.58	-1.3
1,076,335	-		RR42_RS25545	0.61	-0.9
1,076,345	+		RR42_RS25545	0.62	-0.3
1,076,510	+		RR42_RS25545	0.78	+1.5
1,076,511	-		RR42_RS25545	0.78	+0.5
1,076,532	+		RR42_RS25545	0.80	-0.5
1,076,532	+		RR42_RS25545	0.80	+0.6
1,076,533	-		RR42_RS25545	0.80	-0.3
1,076,678	+				+0.9
1,076,679	-				+1.2
1,076,679	-				+0.7
1,076,774	+				-1.8
1,076,774	+				+0.6
1,076,774	+				-0.2
1,076,774	+				-0.1
1,076,775	-				-0.0
1,076,775	-				+0.1
1,076,856	+				-1.1
1,076,857	-				+0.8
1,076,857	-				+0.1
1,076,988	+				+0.4
1,076,989	-				-1.2
1,077,055	+		RR42_RS25550	0.11	+0.1
1,077,609	+				-0.1
1,077,609	+				+0.1
1,077,610	-				+2.5
1,077,698	+				-0.7
1,077,699	-				-0.1
1,077,748	-				-1.6
1,077,784	-				-0.3
1,077,784	-				-1.8
1,077,784	-				-0.4
1,077,856	+				-0.1
1,077,857	-				+0.4
1,077,919	+		RR42_RS25555	0.31	+0.2
1,077,949	+		RR42_RS25555	0.44	+0.4
1,077,949	+		RR42_RS25555	0.44	-2.9
1,077,950	-		RR42_RS25555	0.44	+0.5
1,078,048	+		RR42_RS25555	0.86	-0.2
1,078,049	-		RR42_RS25555	0.86	+0.5
1,078,049	-		RR42_RS25555	0.86	-0.8
1,078,049	-		RR42_RS25555	0.86	+1.5
1,078,156	+				-2.0
1,078,156	+				-1.1
1,078,156	+				-1.5
1,078,157	-				-3.6
1,078,158	+				+1.1
1,078,159	-				-0.9
1,078,217	+				+0.1
1,078,217	+				+0.0
1,078,238	-				-2.4
1,078,238	-				+0.6
1,078,254	+				-0.4
1,078,299	+				-0.1
1,078,311	+				+0.1
1,078,311	+				+0.3
1,078,311	+				-1.3
1,078,312	-				-1.8
1,078,312	-				+0.2
1,078,313	+				-1.5
1,078,383	+		RR42_RS25560	0.12	+0.6
1,078,416	+		RR42_RS25560	0.15	-0.1
1,078,532	+		RR42_RS25560	0.23	-0.3
1,078,608	+		RR42_RS25560	0.29	+0.1