Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25230

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,000,597	-				+0.6
1,000,639	+		RR42_RS25225	0.17	+0.6
1,000,640	-		RR42_RS25225	0.17	+0.9
1,000,881	+				+0.4
1,000,882	-				+0.2
1,000,944	+				+0.4
1,000,944	+				-0.3
1,001,185	+		RR42_RS25230	0.19	-0.6
1,001,428	-		RR42_RS25230	0.35	+1.1
1,001,652	+		RR42_RS25230	0.51	-0.3
1,001,653	-		RR42_RS25230	0.51	-0.5
1,001,752	-		RR42_RS25230	0.57	+0.0
1,001,752	-		RR42_RS25230	0.57	-0.9
1,001,752	-		RR42_RS25230	0.57	+2.5
1,002,004	+		RR42_RS25230	0.75	+0.6
1,002,005	-		RR42_RS25230	0.75	-2.2
1,002,009	+		RR42_RS25230	0.75	+0.3
1,002,010	-		RR42_RS25230	0.75	-0.0
1,002,010	-		RR42_RS25230	0.75	+0.6
1,002,048	-		RR42_RS25230	0.78	+0.3
1,002,048	-		RR42_RS25230	0.78	-0.5
1,002,081	+		RR42_RS25230	0.80	+0.8
1,002,303	+				-1.2
1,002,513	+				+0.2
1,002,514	-				-1.1
1,002,514	-				+0.3
1,002,517	+				-0.5
1,002,517	+				+0.5
1,002,517	+				-2.7
1,002,552	-				+0.2
1,002,552	-				+1.1
1,002,653	+				+1.1
1,002,654	-				+2.5
1,002,791	+		RR42_RS25235	0.10	-1.2
1,002,791	+		RR42_RS25235	0.10	+2.1
1,002,791	+		RR42_RS25235	0.10	+0.2
1,002,791	+		RR42_RS25235	0.10	+0.0
1,002,792	-		RR42_RS25235	0.10	+1.0
1,002,792	-		RR42_RS25235	0.10	-1.7
1,002,792	-		RR42_RS25235	0.10	+0.2
1,003,006	+		RR42_RS25235	0.46	+1.0
1,003,039	-		RR42_RS25235	0.51	-0.2
1,003,099	+		RR42_RS25235	0.61	-0.8
1,003,148	-		RR42_RS25235	0.69	-0.1
1,003,190	+		RR42_RS25235	0.76	+0.9
1,003,225	+		RR42_RS25235	0.82	-2.2
1,003,226	-		RR42_RS25235	0.82	+0.4
1,003,367	+				+0.3
1,003,368	-				-3.5
1,003,368	-				+1.4
1,003,368	-				+1.7
1,003,368	-				-1.5